<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14467

Description Uncharacterized protein
SequenceMKSIDSILHLSWIFGLPASDPGILVVEFLFSIVWQLLDASLDDEGLLNCTPEKKSKWAIEPQEMEIDCHDSYYGKRNEHYEILQESNTVMAIEIIGQFLQNKVTSRILYLARRNLAAHWTSFIQRLQLLGLNSLALRNSKILTPEALLQLTSDSHIVLPRECKTASSQKYLAVMASGSLASFAGLCHGNSRSALWLPLDLVLEDAMDGYQVDATSSVETITGLVKTFQAINGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRLDTRLCMLLCITTLVVSDLIEEEEIAPTNETEYGSVNCWKEKEVPGKRRYDLVSSLQMLGDYQGLLTPPQSVVSAANQAAAKAMLILSGVSIGSAYFECISMKDMPINFSGNLRHLIVEACIARNLLETSAYSWPGYVNGRINQLPHGVPTQVPGWSSFMLGATLTPLVVNALVSSPASSLAELEKVFEIAVNGSDDEKISAATIFCGASLIRGWNIQEHTAHFIIRLLSPPVPADYSGGDSHLIGYAPMLNVLIVGIASVDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNVPWTLTTGEEISAHAVFSNAFTLLLKLWRFNHPPLEHGVGDVPTVASRLTPEYLLSVRNSYLVSSGSAHQDRNKRRLSTVASSSSPEPVFVDSFPKLKVWYRQHQACIASTLSGLVHGTPVHQIVDGLLNMMFTKISRGSQSLTSVNSPSSSSSGPGNEDNSLRPKLPAWDILEAVPFVVDAALTACAHGKLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGIWKPVFMNGTDWPSPAVNLSHVEEQIKKILAATGVHVPSLAPGGSSPATLPLPLAAFVSLTITYKVDRASERFLSLAGPTLECLAAGCPWPCMAIVASLWTQKAKRWSDFLVFSASRTVFLQNGDSMVQLLKSCFTATLGLNATPISSNGGVGALLGHGFGSHFCGGISPVAPGILYLRMYRSITDIVFMTEEILTILMHSVREIACTALSKERLQKLKTTKNEMRYEQVSLAAAMSRVKLAASLGASLVWLTGGLCLVQSLIKETLPSWFISMHWSEQGEGSEGMVAMLGGYALAYFAVLCGAFAWGVDSSSSASKRRPKILGTHMEFLASALDGKISLGCDSATWRAYVSGFVTLMVGCTPKWVLEVDVHVLKRLSNGLRQWNEEELALALLGIGGVGTMGAAAELIVENEM
Length1196
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.08
Grand average of hydropathy0.206
Instability index47.72
Isoelectric point5.97
Molecular weight129658.22
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14467
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     593.15|     163|     277|     244|     411|       1
---------------------------------------------------------------------------
  244-  411 (264.21/194.08)	IAALRLVQRErdPIEGPVPRLDTRL...CMLL..CIT....TLVVSDLIEEEEIAPTNETEYgsVNCWKEKEVP...GKRRYDLVSSLQMLGDYqGLLTP..PQS.VVSAANQAAAKAMLILSGVSIGSAYFECISMKDMPINFSGN..LRHLIVEACIARNLLETSAYSWPGYVNGR.INQLPHG
  413-  507 (107.34/65.88)	.....................................................................PTQVP...GW......SSF.MLG...ATLTPlvVNA.LVSSPASSLAELEKVFE.IAVNGSDDEKISAATI...FCGAslIRGWNIQEHTAHFIIRLLSPPVPADYSGG.DSHL...
  521-  683 (221.60/147.48)	IASVDCVQIF..SLHGLVPQLACSLmpiCEVFgsCVPnvpwTLTTGEEISAHAVFSNAFTLL..LKLWRFNHPPlehGVGDVPTVAS.RLTPEY..LLSV..RNSyLVSSGSAHQDRNKRRLSTVA.SSSSPEPVFVDSFPKLKVWY..RQH...QACIASTL........SGLVHGTpVHQIVDG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.51|      18|      35|     838|     856|       2
---------------------------------------------------------------------------
  838-  856 (26.14/21.81)	AFVSLTITYKVDRASErFL
  876-  893 (33.37/22.67)	AIVASLWTQKAKRWSD.FL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.99|      20|     873|      31|      51|       5
---------------------------------------------------------------------------
   31-   51 (31.07/23.25)	SIVwQLLDASLDDEGLLNCTP
  908-  927 (35.92/20.70)	SMV.QLLKSCFTATLGLNATP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14467 with Med33 domain of Kingdom Viridiplantae
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