<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14460

Description Uncharacterized protein
SequenceMRFRDIVRMGSAEEGEEEARVLNVDETIFVAVGKDVKQSETTLLWAVKNFAGKNICLLHVHKPSRVLSLSEGNGPAGKLKQGAIKVYQALERTKLRKLLDQYLLILIRAGVQANEVWIEMQNVEEGIVELIARHNIRWLVMGAAADEYYSERLAEIKSRKAFFVCNKAASSCHIWFVCKGHLIYTRGDREDESEIEIAPPLLLTSSASGAEQPEHLKSESTHWLRNLASTRQVTLLQSSADAEEDTSELEEISKRLTPLLIDEEEKAACESYHLVEPNIVDTNKNSKQKEYEGTVKRWKEEANAMEAKCKAKAFESLCTKEMSQRKEMEEALARVRQEIDGLKDERNGFIQQLQMAQDNKLALGSQLGDSQCMVKQLEEKILSAVELLITFKDRRDKLQIEHRDAIKKVKWLRTSIKGEAASFCRAEFPVFSFMEINEATHNFDPSWKIGEGRYGSVYKGILRHMHVAIKMLPSYGSKTQLDFQDEVEILSRVRHPNLVTLIGNCPESRSLVYEYLRNGCLEDRLACKGNTPPLPWKIRTCIATEICSALVFLHSNIPCLVHGNVKPSNILFDANFVSKLGDLGIVGLIPQNENPANFARIHNDPNGTDVYMDPEYLETGNLTPESDVYSLGVILLQLLTARPLLGIVKDVKSALENDNIDALLDISAGDWPLEQAKELAYLALRCCEKNRLNRPDLWVVHEAMGASCAASASCLISKKLIRTPSHFVCPIFQEVMKDPHIAADGFTYEEEAIRGWLKGGHNTSPMTNLKLEHCNLVPNYALQYAIQQWQLEL
Length793
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.305
Instability index49.43
Isoelectric point5.82
Molecular weight89444.51
Publications
PubMed=23525075

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14460
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.84|      35|      56|     182|     216|       1
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  182-  216 (60.68/38.46)	LIYTRGD.REDESEI.EIA...PPLLLTSSASGAEQPEHL
  235-  274 (45.16/26.84)	LLQSSADaEEDTSELeEISkrlTPLLIDEEEKAACESYHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     196.15|      67|     562|      82|     165|       2
---------------------------------------------------------------------------
   86-  165 (97.18/99.98)	VYQALERTKLRKLLDqyllilIRAG....VQANEV.WIEMQNVEEgivELIARHNIrWLV...MG....AAADEYYSERLAEIKSRkafFVC
  651-  729 (98.97/60.03)	VKSALENDNIDALLD......ISAGdwplEQAKELaYLALRCCEK...NRLNRPDL.WVVheaMGascaASASCLISKKLIRTPSH...FVC
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14460 with Med32 domain of Kingdom Viridiplantae
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