<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14457

Description Uncharacterized protein
SequenceMFTSLHRRFPAVRAEKLHIEMDCIEKGIVELISQHGIRKLVMGAAADKYHSRKMMDLKSKKAIYVRQQAPVSCHIQFICKGHLIYTREGNSDGVDTDVPLLQPSPNSDPEQSPHHFRSRSAVTLGQNNRAKLTNPAQDLYRRVRSANMEKYGGSITEATSSDGTEGLSTPSRFEAGGSPDDWDRVSRRSVSGYSSCSSALGDLALVQYDRIEGSENGSTESHALSHFKELNHSSPPSVLDGNIDDSLYDHLEQAMAEAENAKREAFREGIRRGKAEKDAIDAIRRAKASELLYNEELRQRKEIEEALAREREELEKMKKQRDEVMEELRAALDHKSLLESQIAESDQMAVNLEQKIISAVELLQNYKKERDELHVERDNALREAEELRRKQGEASSSHLPQFFTEFSFTEIEEATRNFDPSLKIGEGGYGSIFKGSLRHTQVAIKLLHAHSMQGPSEFQQEVDVLSKLRHSNLVTLIGACPESWTLIYEYLSNGSLEDRLSCKDNTPPLSWQTRIRIATELCSVLIFLHSSKPHGIVHGDLKPANILLDDNFVSKLSDFGISRLLSRGEGSSNNTTLYCRTDPKGTFAYIDPEFLSSGELTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDSGKLETLLDPLAGDWPFVQAEQLACLAMRCCEMSRKRRADLVSDVWRVLDPMRVSCGCSSSFRLGTEEHFQPPSYFICPIFQEVMQDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLKLEHKNLVPNHALRSAIQEWLQQH
Length776
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.532
Instability index51.53
Isoelectric point5.82
Molecular weight87302.32
Publications
PubMed=23525075

Function

Annotated function Functions as an E3 ubiquitin ligase. 
ECO:0000256	ARBA:ARBA00003861
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14457
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      83.68|      25|     353|     374|     398|       1
---------------------------------------------------------------------------
  257-  290 (20.36/ 9.05)	..EAENAKREAfrEGIRRGKAEkdaidairrAKASE
  374-  398 (46.11/29.72)	HVERDNALREA..EELRRKQGE.........ASSSH
  723-  737 (17.21/ 6.52)	HVAADGFTYEA..EALR...................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.38|      15|     350|     315|     333|       4
---------------------------------------------------------------------------
  298-  312 (23.43/10.20)	RQRKEIEEALARERE
  319-  333 (24.95/24.77)	KQRDEVMEELRAALD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     214.27|      65|     102|     432|     499|       6
---------------------------------------------------------------------------
  432-  499 (107.97/88.71)	IFKGSLRHTQVaikLLHAHSMQGPSEFQQEVDVLSKLRHSNLVTLIGACPESWTLIY...EYLSNGSLEDR
  536-  603 (106.30/79.16)	IVHGDLKPANI...LLDDNFVSKLSDFGISRLLSRGEGSSNNTTLYCRTDPKGTFAYidpEFLSSGELTPK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.31|      25|     638|       1|      25|       7
---------------------------------------------------------------------------
    1-   25 (46.29/29.09)	MFTSLHRRFPAVRAEKLH.IEMDCIE
  641-  666 (43.03/26.57)	LLDPLAGDWPFVQAEQLAcLAMRCCE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14457 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KYGGSITEATSSDGTEGLSTPSRFEAGGSPDDWDRVSRR
2) QYDRIEGSENGSTESHALSHFKELNHSSPPSVLDGNIDDS
3) VDTDVPLLQPSPNSDPEQSPHHFRSRSAVTLGQNNRAKLTNPAQDLYRRVRSAN
150
207
94
188
246
147










Molecular Recognition Features






MoRF SequenceStartStop




NANANA