<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14455

Description Uncharacterized protein
SequenceMQRYHATGCTSAVNNNAIGGTSGRDSVRADSAALPANLSLASRRASQLNPYKLKCEKDPLNGRLGPPDFHPQTPNCPEETLTREYVQFGYRETVEGIEESREISLSQAQVFNKPLVFRCKEAIKKRFRAINESRAQKRKAGQVYGAPLADTLLSKPGVFPEQRHCGEDLRKKWIEGLSQQHKRLRSLADHVPHGYRKRPLFEVLTRNNVPLLRATWFIKVTYLNQVRPGSAIISSGAPDKAQLSRTELWTKDVIDYLQYLLDELFSRNNSHSTSHNRDRSPQTLYAGSVPQRSDPASAVPDGEEPSLHFKWWYVVRLLQWHHAEGLLLPTLIIEWVLSQLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIREPSQGGSDVVGNSRRAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCVVSYIVNDGLPKMSEDVRKIGNGPAEVASAFRSKGFDAQYQSLAFDHVVSSIQKRADNLAKAASPSYPFHSIAKAVQALDRSLVQGDVRGAYRFLFEDPCDGVANESWITGVSPCLRTSLKWIGTANLSFVCSVFFLCEWATCDFRDFRTAPPCELKFTGRKDFSQVHVVIQLLKLKIRDLQCSPQRKNDSFLGVGSVAKGSTQHNNFPVRISMGNSYETKNRSKNGDQRSIKSSNIFESPGPLHDIIVCWIDQHEAGKGEGFKRLQLLVIELIRSGIFHPHAYVRQLIVSGIMDTDGPVVEVDRRKRHYQILKLLPGLLMRHALKEAGIAEEPQLSEAMNLYSTERRLILRGLLSDQNKNANMIVSALKQKHFPVPGKDGPLPVSVDQWKAVQSSSNILSVKGGKSDADLEELKEAISVLLQLPNSSSPSTETGLDESQGSVKRPFGSIYNKMDLGEGTPGCEECKRAKRQKVSDERSSYIQGNSPIPSDDEDTWWMRKRLKSLEPMKVDPPVKSTKQVSRIRQKIVRKTQSLAQLAAARIEGSQGASTSHVCNNKVSCPHHRTGLEGETPKSTDPTKVSHGGDIVSIGKALKRLRFMEKRTITVWLMTVIRQLVEETEKTIAKVGQFGRTFTSVDDRSSIRWKLGEDELSAALYLMDVSNDLVLAVKFLLWLLPKVSSPSSTFHSGRNILLLPKNVESQVCEVGEAFLISSLRRYENIVIATDLIPEVLSAIMHRASAIVASNGRLSGSPALAYSRYLSKRNSNVASVIEWEKNFKATCDKRLLSELESGQSVDGELGFPLGVPAGVEDLDDFFRQKISGVRLSRAGLNMREIVQRNVNVEDALHYFYGKERKLFAAGAHKGPPVEKWDDGYQIAQNVITELMDCIRQTGGAAQEGDPSLVSSAVSAIVGNVGPIIAKVSDFRAGGSYSSFPAATDSLNCARRILRIHISCLCLLKEALGERQTRVFEVALATEACSALAGVFSPGKASRNQYQSSPESHDSNTNASNDILNSSTKIGLGRTTKVAAAVSALIIGAVAQGVTSLERLVTVFKLKERLDIIQFVRSSRSNSNGNARSSGAFKGDISLEVYVHWFRLLVGNCRTVSDGLVVELLGEPTVIALSRMQRMLPLGLVFPPAYSIFAFVVWRPFLLNTSIAAREDFNQLYQSLTTAIGDAVKHSPFRDVCLRDSQGFYDLVAADGSDAEFAAILELNGSDMLLKSTAFVPLRARLFLNAIMDCKMPVSLFMQCEGNQVSGHGESKVQYAERETKLVDKLVHILDTLQPAKFHWQWVELRLLLNEQALIEKLETQDMSLVDAIRSSSPSPEKAAASENEKYFIEIILTRLLVRPDAAPLFSDVVHLFGRSLADSMLLQVKWFLGGSDVLFGRKTIRQRLLNIAETKGLSTKTQFWKPWGWCSYGFDPVTNKGDKKKFEVTSLEEGEMVEEGIDSKKYGKGLTPTYDIESYNVTQQRVTERALIELLLPCIDQSSDDSRNTFANDLIKQLSNIEVQISAVTRGTNKQAGPAPSGVEGPTSKGNNRKGIRGGSPGLARRAAVAADSAPPSPAALRASMSLRLQLLLRLLPIICADRHSTCCHSWLF
Length2029
PositionKinase
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.242
Instability index47.51
Isoelectric point9.00
Molecular weight224766.41
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14455
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.37|      19|      31|      97|     115|       1
---------------------------------------------------------------------------
   97-  115 (32.16/20.45)	IEESREISLSQAQVFNKPL
  130-  148 (33.21/21.37)	INESRAQKRKAGQVYGAPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     190.64|      62|     530|    1368|    1498|       2
---------------------------------------------------------------------------
 1430- 1498 (79.83/136.47)	ESHDSNTNASNDILNSSTkiGLGRTTKVAAAvSALIIGAVAQGVTSLeRLVTVFKLkerLDIIQFVRSS
 1960- 2021 (110.81/44.72)	EGPTSKGNNRKGIRGGSP..GLARRAAVAAD.SAPPSPAALRASMSL.RLQLLLRL...LPIICADRHS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.96|      23|     530|     547|     570|       3
---------------------------------------------------------------------------
  547-  570 (42.30/32.79)	RTSLKW.IGTANLS...........FVCSVFFLCeW
 1069- 1103 (29.66/17.04)	RSSIRWkLGEDELSaalylmdvsndLVLAVKFLL.W
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.42|      13|     745|     859|     871|       5
---------------------------------------------------------------------------
  859-  871 (23.74/13.87)	SPSTETGLDESQG
 1610- 1622 (25.68/15.66)	SPFRDVCLRDSQG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.17|      14|     745|      53|      66|       6
---------------------------------------------------------------------------
   53-   66 (27.19/14.11)	LKCEKDPLNGRLGP
  799-  812 (27.98/14.73)	LKQKHFPVPGKDGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     153.77|      47|     530|     174|     263|       9
---------------------------------------------------------------------------
  211-  262 (71.01/109.73)	LLRATWFIKVTylnQVRPGSAIIS....SGAPDKAQLSRTELWTKdvIDYLQYLLD
 1801- 1851 (82.76/35.02)	LLQVKWFLGGS...DVLFGRKTIRqrllNIAETKGLSTKTQFWKP..WGWCSYGFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.64|      41|     530|     975|    1065|      10
---------------------------------------------------------------------------
  933-  974 (62.59/98.75)	KSLEPMKVD...PPVKSTKQVSRIR..QK.........IVRKTQSLAQLAAARIeG
 1003- 1057 (47.05/76.61)	KSTDPTKVShggDIVSIGKALKRLRfmEKrtitvwlmtVIRQLVEETEKTIAKV.G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.52|      53|     245|     627|     682|      15
---------------------------------------------------------------------------
  627-  682 (88.01/63.62)	SVAK..GSTqHNNFPVRISMGNSYETK..NRSKNGDQRSikSSNIFESPGPLHDIIVCWI
  872-  928 (90.51/55.41)	SVKRpfGSI.YNKMDLGEGTPGCEECKraKRQKVSDERS..SYIQGNSPIPSDDEDTWWM
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14455 with Med12 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PGCEECKRAKRQKVSDERSSYIQGNSPIPSDDEDTWWMRKRLKSLEPMKVDPPVKSTKQVSRI
2) TRGTNKQAGPAPSGVEGPTSKGNNRKGIRGGSPG
3) TSHVCNNKVSCPHHRTGLEGETPKSTDPTKVS
891
1945
980
953
1978
1011










Molecular Recognition Features






MoRF SequenceStartStop




1) WWMRKRLK
926
933