<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14453

Description Uncharacterized protein
SequenceMQRYHATGCTSAVNNNAIGGTSGRDSVRADSAALPANLSLASRRASQLNPYKLKCEKDPLNGRLGPPDFHPQTPNCPEETLTREYVQFGYRETVEGIEESREISLSQAQVFNKPLVFRCKEAIKKRFRAINESRAQKRKAGQVYGAPLADTLLSKPGVFPEQRHCGEDLRKKWIEGLSQQHKRLRSLADHVPHGYRKRPLFEVLTRNNVPLLRATWFIKVTYLNQVRPGSAIISSGAPDKAQLSRTELWTKDVIDYLQYLLDELFSRNNSHSTSHNRDRSPQTLYAGSVPQRSDPASAVPDGEEPSLHFKWWYVVRLLQWHHAEGLLLPTLIIEWVLSQLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIREPSQGGSDVVGNSRRAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCVVSYIVNDGLPKMSEDVRKIGNGPAEVASAFRSKGFDAQYQSLAFDHVVSSIQKRADNLAKAASPSYPFHSIAKAVQALDRSLVQGDVRGAYRFLFEDPCDGVANESWITGVSPCLRTSLKWIGTANLSFVCSVFFLCEWATCDFRDFRTAPPCELKFTGRKDFSQVHVVIQLLKLKIRDLQCSPQRKNDSFLGVGSVAKGSTQHNNFPVRISMGNSYETKNRSKNGDQRSIKSSNIFESPGPLHDIIVCWIDQHEAGKGEGFKRLQLLVIELIRSGIFHPHAYVRQLIVSGIMDTDGPVVEVDRRKRHYQILKLLPGLLMRHALKEAGIAEEPQLSEAMNLYSTERRLILRGLLSDQNKNANMIVSALKQKHFPVPGKDGPLPVSVDQWKAVQSSSNILSVKGGKSDADLEELKEAISVLLQLPNSSSPSTETGLDESQGSVKRPFGSIYNKMDLGEGTPGCEECKRAKRQKVSDERSSYIQGNSPIPSDDEDTWWMRKRLKSLEPMKVDPPVKSTKQVSRIRQKIVRKTQSLAQLAAARIEGSQGASTSHVCNNKVSCPHHRTGLEGETPKSTDPTKVSHGGDIVSIGKALKRLRFMEKRTITVWLMTVIRQLVEETEKTIAKVGQFGRTFTSVDDRSSIRWKLGEDELSAALYLMDVSNDLVLAVKFLLWLLPKVSSPSSTFHSGRNILLLPKNVESQVCEVGEAFLISSLRRYENIVIATDLIPEVLSAIMHRASAIVASNGRLSGSPALAYSRYLSKRNSNVASVIEWEKNFKATCDKRLLSELESGQSVDGELGFPLGVPAGVEDLDDFFRQKISGVRLSRAGLNMREIVQRNVNVEDALHYFYGKERKLFAAGAHKGPPVEKWDDGYQIAQNVITELMDCIRQTGGAAQEGDPSLVSSAVSAIVGNVGPIIAKVSDFRAGGSYSSFPAATDSLNCARRILRIHISCLCLLKEALGERQTRVFEVALATEACSALAGVFSPGKASRNQYQSSPESHDSNTNASNDILNSSTKIGLGRTTKVAAAVSALIIGAVAQGVTSLERLVTVFKLKERLDIIQFVRSSRSNSNGNARSSGAFKGDISLEVYVHWFRLLVGNCRTVSDGLVVELLGEPTVIALSRMQRMLPLGLVFPPAYSIFAFVVWRPFLLNTSIAAREDFNQLYQSLTTAIGDAVKHSPFRDVCLRDSQGFYDLVAADGSDAEFAAILELNGSDMLLKSTAFVPLRARLFLNAIMDCKMPVSLFMQCEGNQVSGHGESKVQYAERETKLVDKLVHILDTLQPAKFHWQWVELRLLLNEQALIEKLETQDMSLVDAIRSSSPSPEKAAASENEKYFIEIILTRLLVRPDAAPLFSDVVHLFGRSLADSMLLQVKWFLGGSDVLFGRKTIRQRLLNIAETKGLSTKTQFWKPWGWCSYGFDPVTNKGDKKKFEVTSLEEGEMVEEGIDSKKYGKGLTPTYDIESYNVTQQRVTERALIELLLPCIDQSSDDSRNTFANDLIKQLSNIEVQISAVTRGTNKQAGPAPSGVEGPTSKGNNRKGIRGGSPGLARRAAVAADSAPPSPAALRASMSLRLQLLLRLLPIICADREPSGRNMRQGLASVVLRLLGNRVVNEDAELCVNLLQSSFSKREAESSTEAASASFADLSSESLFDQLLLVLHGLLSSCQPSWLRPTKSTNESGKDFAAFDREMADHLQSDLDRMQLPERIRWRIQTAMPVVVPSIRCFVSCQPPPVPNTALAVLQTSISTPGFYSGISNPPQRNQVPLARTVANIPGKSKSLPSQDYDMDIDPWTLLEDGAGSGPSSSNSALIGSADHGNLRASSWLKGAVRVRRKDLTYIGAVDDDS
Length2277
PositionKinase
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.251
Instability index48.27
Isoelectric point8.88
Molecular weight251529.16
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of development, heterochronic	GO:0040034	IEA:EnsemblPlants
regulation of radial pattern formation	GO:0090213	IEA:EnsemblPlants
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14453
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     213.90|      70|     530|    1368|    1506|       1
---------------------------------------------------------------------------
 1430- 1506 (93.89/159.03)	ESHDSNTNASNDILNSSTkiGLGRTTKVAAAvSALIIGAVAQGVTSLeRLVTVFKLkerLDIIQFVR..SSRSNSNGNA
 1960- 2031 (120.01/55.26)	EGPTSKGNNRKGIRGGSP..GLARRAAVAAD.SAPPSPAALRASMSL.RLQLLLRL...LPIICADRepSGRNMRQGLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.56|      22|     530|     547|     570|       2
---------------------------------------------------------------------------
  538-  567 (35.63/23.26)	WitgvspclRTS....LKWIGTANLSFVCSVFFL
  570-  603 (27.93/10.28)	WatcdfrdfRTAppceLKFTGRKDFSQVHVVIQL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     168.28|      54|     530|     131|     303|       3
---------------------------------------------------------------------------
  185-  262 (72.86/136.03)	RSLADHVphgyrkrplfevltrnnvpLLRATWFIKVTylnQVRPGSAIIS....SGAPDKAQLSRTELWTKdvIDYLQYLLD
 1794- 1851 (95.42/26.39)	RSLADSM...................LLQVKWFLGGS...DVLFGRKTIRqrllNIAETKGLSTKTQFWKP..WGWCSYGFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.37|      19|      31|      97|     115|       4
---------------------------------------------------------------------------
   97-  115 (32.16/23.09)	IEESREISLSQAQVFNKPL
  130-  148 (33.21/24.13)	INESRAQKRKAGQVYGAPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.58|      11|      81|     727|     737|       5
---------------------------------------------------------------------------
  727-  737 (21.17/13.43)	DGPV.VEVDRRK
  810-  821 (18.41/10.58)	DGPLpVSVDQWK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.24|      18|     530|     686|     723|       6
---------------------------------------------------------------------------
  665-  682 (35.46/36.76)	SNIFESPGPLHDIIVCWI
  706-  723 (32.79/ 6.98)	SGIFHPHAYVRQLIVSGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.40|      13|      31|     336|     348|       7
---------------------------------------------------------------------------
  336-  348 (20.06/12.49)	VLSQLQEKELLEI
  364-  376 (21.34/13.80)	VLSQTYVRNLVGV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     178.39|      57|      69|    1288|    1346|      11
---------------------------------------------------------------------------
 1288- 1346 (94.37/66.09)	AAGAHKGPP..VEKWDDGYQIAQNVITELmdC.IRQTGGAAQEG..DPSLVSSAVSAIVGNVGP
 1356- 1417 (84.02/52.16)	AGGSYSSFPaaTDSLNCARRILRIHISCL..ClLKEALGERQTRvfEVALATEACSALAGVFSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     135.29|      46|    1558|     455|     517|      12
---------------------------------------------------------------------------
  467-  517 (70.13/67.44)	DAQYQSLaFDHVVSSIQkradNLAKAASPSY..PFHSI...AKAVQALDRSL...VQGD
 2076- 2129 (65.16/30.75)	DLSSESL.FDQLLLVLH....GLLSSCQPSWlrPTKSTnesGKDFAAFDREMadhLQSD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      54.65|      12|      30|    1854|    1865|      19
---------------------------------------------------------------------------
 1854- 1865 (19.88/12.21)	TNKG.DKKKFEVT
 1873- 1885 (14.74/ 6.90)	VEEGiDSKKYGKG
 1887- 1898 (20.03/12.36)	TPTY.DIESYNVT
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14453 with Med12 domain of Kingdom Viridiplantae
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