<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14452

Description Uncharacterized protein
SequenceMQRYHATGCTSAVNNNAIGGTSGRDSVRADSAALPANLSLASRRASQLNPYKLKCEKDPLNGRLGPPDFHPQTPNCPEETLTREYVQFGYRETVEGIEESREISLSQAQVFNKPLVFRCKEAIKKRFRAINESRAQKRKAGQVYGAPLADTLLSKPGVFPEQRHCGEDLRKKWIEGLSQQHKRLRSLADHVPHGYRKRPLFEVLTRNNVPLLRATWFIKVTYLNQVRPGSAIISSGAPDKAQLSRTELWTKDVIDYLQYLLDELFSRNNSHSTSHNRDRSPQTLYAGSVPQRSDPASAVPDGEEPSLHFKWWYVVRLLQWHHAEGLLLPTLIIEWVLSQLQEKELLEIMQLLLPIVYGVLETVVLSQTYVRNLVGVAVRFIREPSQGGSDVVGNSRRAYTVSTVVEMLRYLILAVPDTFVALDCFPLPSCVVSYIVNDGLPKMSEDVRKIGNGPAEVASAFRSKGFDAQYQSLAFDHVVSSIQKRADNLAKAASPSYPFHSIAKAVQALDRSLVQGDVRGAYRFLFEDPCDGVANESWITGVSPCLRTSLKWIGTANLSFVCSVFFLCEWATCDFRDFRTAPPCELKFTGRKDFSQVHVVIQLLKLKIRDLQCSPQRKNDSFLGVGSVAKGSTQHNNFPVRISMGNSYETKNRSKNGDQRSIKSSNIFESPGPLHDIIVCWIDQHEAGKGEGFKRLQLLVIELIRSGIFHPHAYVRQLIVSGIMDTDGPVVEVDRRKRHYQILKLLPGLLMRHALKEAGIAEEPQLSEAMNLYSTERRLILRGLLSDQNKNANMIVSALKQKHFPVPGKDGPLPVSVDQWKAVQSSSNILSVKGGKSDADLEELKEAISVLLQLPNSSSPSTETGLDESQGSVKRPFGSIYNKMDLGEGTPGCEECKRAKRQKVSDERSSYIQGNSPIPSDDEDTWWMRKRLKSLEPMKVDPPVKSTKQVSRIRQKIVRKTQSLAQLAAARIEGSQGASTSHVCNNKVSCPHHRTGLEGETPKSTDPTKVSHGGDIVSIGKALKRLRFMEKRTITVWLMTVIRQLVEETEKTIAKVGQFGRTFTSVDDRSSIRWKLGEDELSAALYLMDVSNDLVLAVKFLLWLLPKVSSPSSTFHSGRNILLLPKNVESQVCEVGEAFLISSLRRYENIVIATDLIPEVLSAIMHRASAIVASNGRLSGSPALAYSRYLSKRNSNVASVIEWEKNFKATCDKRLLSELESGQSVDGELGFPLGVPAGVEDLDDFFRQKISGVRLSRAGLNMREIVQRNVNVEDALHYFYGKERKLFAAGAHKGPPVEKWDDGYQIAQNVITELMDCIRQTGGAAQEGDPSLVSSAVSAIVGNVGPIIAKVSDFRAGGSYSSFPAATDSLNCARRILRIHISCLCLLKEALGERQTRVFEVALATEACSALAGVFSPGKASRNQYQSSPESHDSNTNASNDILNSSTKIGLGRTTKVAAAVSALIIGAVAQGVTSLERLVTVFKLKERLDIIQFVRSSRSNSNGNARSSGAFKGDISLEVYVHWFRLLVGNCRTVSDGLVVELLGEPTVIALSRMQRMLPLGLVFPPAYSIFAFVVWRPFLLNTSIAAREDFNQLYQSLTTAIGDAVKHSPFRDVCLRDSQGFYDLVAADGSDAEFAAILELNGSDMLLKSTAFVPLRARLFLNAIMDCKMPVSLFMQCEGNQVSGHGESKVQYAERETKLVDKLVHILDTLQPAKFHWQWVELRLLLNEQALIEKLETQDMSLVDAIRSSSPSPEKAAASENEKYFIEIILTRLLVRPDAAPLFSDVVHLFGRSLADSMLLQVKWFLGGSDVLFGRKTIRQRLLNIAETKGLSTKTQFWKPWGWCSYGFDPVTNKGDKKKFEVTSLEEGEMVEEGIDSKKYGKGLTPTYDIESYNVTQQRVTERALIELLLPCIDQSSDDSRNTFANDLIKQLSNIEVQISAVTRGTNKQAGPAPSGVEGPTSKGNNRKGIRGGSPGLARRAAVAADSAPPSPAALRASMSLRLQLLLRLLPIICADREPSGRNMRQGLASVVLRLLGNRVVNEDAELCVNLLQSSFSKREAESSTEAASASFADLSSESLFDQLLLVLHGLLSSCQPSWLRPTKSTNESGKDFAAFDREMADHLQWWCFVISFVTNSL
Length2140
PositionKinase
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.236
Instability index47.43
Isoelectric point8.88
Molecular weight236943.93
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14452
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     213.90|      70|     530|    1368|    1506|       1
---------------------------------------------------------------------------
 1430- 1506 (93.89/147.67)	ESHDSNTNASNDILNSSTkiGLGRTTKVAAAvSALIIGAVAQGVTSLeRLVTVFKLkerLDIIQFVR..SSRSNSNGNA
 1960- 2031 (120.01/51.23)	EGPTSKGNNRKGIRGGSP..GLARRAAVAAD.SAPPSPAALRASMSL.RLQLLLRL...LPIICADRepSGRNMRQGLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.96|      23|     530|     547|     570|       2
---------------------------------------------------------------------------
  547-  570 (42.30/33.97)	RTSLKW.IGTANLS...........FVCSVFFLCeW
 1069- 1103 (29.66/17.65)	RSSIRWkLGEDELSaalylmdvsndLVLAVKFLL.W
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     225.61|      78|     530|     131|     303|       3
---------------------------------------------------------------------------
  154-  261 (101.14/149.20)	SKPGvfPEQRHCGEDlRKKWIEGLsqqHKRL..................RSLADHVphgyrkrpLFEVltrnnvpllraTWFIKVTylnQVRPGSAIIS....SGAPDKAQLSRTELWTKdvIDYLQYLL
 1751- 1850 (124.48/ 8.34)	SSPS..PEKAAASEN.EKYFIEII...LTRLlvrpdaaplfsdvvhlfgRSLADSM........LLQV...........KWFLGGS...DVLFGRKTIRqrllNIAETKGLSTKTQFWKP..WGWCSYGF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.58|      11|      81|     727|     737|       4
---------------------------------------------------------------------------
  727-  737 (21.17/11.90)	DGPV.VEVDRRK
  810-  821 (18.41/ 9.35)	DGPLpVSVDQWK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.59|      18|     530|     131|     150|       6
---------------------------------------------------------------------------
   98-  115 (30.27/15.61)	EESREISLSQAQVFNKPL
  131-  148 (31.32/24.48)	NESRAQKRKAGQVYGAPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.29|      13|     613|     489|     501|      12
---------------------------------------------------------------------------
  489-  501 (25.82/15.86)	LAKAASPSYPFHS
 1105- 1117 (25.47/15.53)	LPKVSSPSSTFHS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14452 with Med12 domain of Kingdom Viridiplantae
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