<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14434

Description Uncharacterized protein
SequenceMSLKESDDEPVALSLESDKPEIGSIESIEEDEEEEEEEEEEPVDKSGDPMEEDSVSPAAVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVNADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQPSQGPANLVRDASRWQREHEWQQDIAVVTKWLSGVSPYRWLSSKSSAASNAKSTFEEKFLSQQSQNSARWPNFLCVCSVFSSGSVQLHWSQWPPNQNSAAPKWFQTSKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTVVVWEVTPGLGNGFQITPKISTSNGVPPSLNPPNWAGFSPLAAYLFSWQDYLISEAKQGRKQTDPDFSDTVPLHCSPVSNFSAYVSPEAAAQSATTTTWGSGVTAVAFDPTCGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWKSSLQPVVLHQIFGNPTSSFGGQAPMQTVWMSKVDTSIQPTNDFKSHQAAASGATSDARKSTDSSLEKSKRVSFDPFDLPSDVRTLARIVYSAHGGEIAVAFLRGGVHIFSGPNFAPVDNYQINVGSAIATPAFSSTSCCSASVWHDSGKDRTVLKIIRVLPPVVSSSQVKANSSTWERAIAERFWWSLLVGVDWWDAVGCTQSAAEDGIVYLNSVIAVLDADFHSLPSTQHRQQYGPSLDRIKCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALINPSALVAEPWQASGETLSGIDPEAMAVEPALVPNIQAYVDAVLDLASHFITRLRRYASFCRTLANHAGSAGTGSNRNMVASPTQSSASPATSQGGQTGTTTSTGNTQMQAWVQGAIAKISSTSDGVPNSTPNPISGPSSFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFFFRRTQLPRFVGGAQRNTDANMQKPQPAAPGKVEEVSSVTVKSSSTMVRQDEGQVARAGQIIPGAKGAEEGPAGRSRLGAGNAGQGYTFEEVKVLFLILMDLCRRTATLAHPLPVSQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMQNMPRPRGADAAGLLLRELELHPPAEEWHRRNMYGGPWSDPDDMGPQDDTPKLCNSADPLGSNSLESCEVYYGAHGLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTAVWKTGLEGVWYKCIRCLRQTSAFASPGATSRPNQTGRETWWISRWAYCCPMCGGTWVRVE
Length1243
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.08
Grand average of hydropathy-0.246
Instability index47.48
Isoelectric point5.76
Molecular weight134610.94
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:EnsemblPlants

GO - Biological Function
GO - Biological Process
circadian regulation of gene expression	GO:0032922	IEA:EnsemblPlants
positive regulation of plant-type cell wall cellulose biosynthetic process	GO:2001011	IEA:EnsemblPlants
positive regulation of systemic acquired resistance	GO:1901672	IEA:EnsemblPlants
regulation of cell wall pectin metabolic process	GO:1902066	IEA:EnsemblPlants
regulation of ethylene-activated signaling pathway	GO:0010104	IEA:EnsemblPlants
regulation of jasmonic acid mediated signaling pathway	GO:2000022	IEA:EnsemblPlants
regulation of long-day photoperiodism, flowering	GO:0048586	IEA:EnsemblPlants
regulation of transcription, DNA-templated	GO:0006355	IBA:GO_Central
response to osmotic stress	GO:0006970	IEA:EnsemblPlants
root development	GO:0048364	IEA:EnsemblPlants
trichome branching	GO:0010091	IEA:EnsemblPlants
trichome papilla formation	GO:1905499	IEA:EnsemblPlants









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14434
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.86|      11|     659|     442|     452|       1
---------------------------------------------------------------------------
  442-  452 (26.02/13.91)	YMSPY.DPDE.GP
 1102- 1114 (18.84/ 7.82)	YGGPWsDPDDmGP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.79|      23|     526|     335|     357|       2
---------------------------------------------------------------------------
  103-  120 (25.55/ 8.40)	....TCARIPSSnANPPFW......IPI
  335-  357 (48.09/22.04)	KI.STSNGVPPS.LNPPNWAG...FSPL
  861-  886 (34.16/13.62)	KIsSTSDGVPNS..TPNPISGpssFMPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     153.15|      36|     171|     394|     432|       3
---------------------------------------------------------------------------
  394-  429 (63.74/30.21)	VSNFSAYVSPEAAA...QSATTTTWGSGVTAVAF.DPTCG
 1167- 1194 (33.01/12.98)	...LGAYLGIMGSR...RDVVTAVWKTGLEGVWY......
 1200- 1236 (56.41/25.49)	LRQTSAFASPGATSrpnQTGRETWW...ISRWAYcCPMCG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     211.76|      70|     177|     505|     581|       6
---------------------------------------------------------------------------
  505-  581 (105.31/77.72)	DFksHqaaaSGATSDARKSTDSSLEKSKRVSFDPFDlPSDVRTL.....ARIVYSAHGGEIAVAFLRGGVHI.....FSGPNFAPVD
  685-  764 (106.45/61.74)	DF..H....SLPSTQHRQQYGPSLDRIKCRLLEGTN.AQEVRAMvldmqARLLLDMLGKGIESALINPSALVaepwqASGETLSGID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.35|      27|     114|     776|     805|       7
---------------------------------------------------------------------------
  776-  805 (41.06/44.97)	PNIQAyVDAVLDlaSHFITRLRRYASFC....RT
  894-  924 (48.28/37.70)	PGTPA.VRLIGD..CHFLHRLCQLLLFCfffrRT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.60|      25|     574|     464|     489|      11
---------------------------------------------------------------------------
  464-  489 (42.90/30.13)	SSLQpVVLHQIFGN....PTSSFGGQAP.MQ
 1040- 1069 (36.69/20.19)	SNIQ.VRLHYIDGNytvlPEVVEASLGPhMQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14434 with Med16 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GTGSNRNMVASPTQSSASPATSQGGQTGTTTSTGNTQ
2) MSLKESDDEPVALSLESDKPEIGSIESIEEDEEEEEEEEEEPVDKSGDPME
814
1
850
51










Molecular Recognition Features






MoRF SequenceStartStop




1) MSLKESDDEPVALSLESDKPEIGSIESIEEDEEEEE
1
36