<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14428

Description Uncharacterized protein
SequenceMGSMGMVMGSELERRVVELVTAKQKESPVVWAMEVGNWVEAVPSIELGEVLVSQLCFQHNRPSLWKFLDHALSSGLLCPLHVLSILSSRVVPHRRAQPEAYRLYLELLRRYAFSFGPLAGDASKEKITESIDAALQLSQTFKVHVVELGHALVLFFFSVIISLIDSTLDDWGFKMTSRKRPRSAFGGSDNDMEIDSMESQNLKIKEHHERIRKRNSLLAIEVLAKLTESRKSLVLLRLVHLNMPERFNGLLQRLRFLKGRQLASSDLNSALQLLARLSANIHSVVGFKHQLNKHRLFGVLLDIGSRKPVFHCNSGFGHSTCWVRFDIYMENAMDGKQLSIKSFIDILAEGILTLQVFNQASWQETFLELWLSALRLVQRERDPLEGPIPHLEARLCVLLSIVPLAIANVLEDKIKVNSSSIEGDTVSGNMESGYGDEMDGKANTSRKQGLISSLQVLGNFSGLLCPPSSVVNSSNIAATKAARFVLNSKNEKDASGGGSDVDTSIKSGGDMRHLIVEACIARNLIDTSAYFWPGYVSASTISLSDTSPVQKSLWSTFMEGAPLRDSLIKSLIRTPVSSLAEVEKLYHIALTGSEEEKSAAAKILCGASLKSGWNIQEHVVHFVVKLLSPPVPPNYSGSRSHLIDYMSMLSALLFGTSSVDTVHILSLHGMVPEVAASLITLCEVFGSLKPASSNKSSIGDESSVYMVFSLAFLFLLRLWKFYRPPLEQYITERGGAVGGVLTLEYLLLLRNGHTAPARNETNSSGDQLESASREPMYIDSYPKLQAWYCQNKSCIASTLSGLSSGNPVHEVANKILSMIYWKITRTGDPSSNSSGPSSSSISGSPADTGEDMCQRPLLPAWEILEAIPFVLEAILTACAYGRLSSRDLTTGLRDLVEFLPASLAAIISYFSAEVTRGIWKQVAMNGIDWPSPAAILQSVESEIKEILNAVGVNVPSCGISTVMLPLPLAALVSLTITFKLEKSLEYIHAVAGLALENCASGCPWPSMPIVGCLWAQKVRRWHHFIVVSCSRSVFRQNKDAVAQLLRSCFSSFLGSLHASTSSLSSQSSVNGLLGFTIADIGACPSVAPGFLYLRSCRTIHVVQHVNDVIVGLVAEYAAKLAERCASTDSPRLKSSQASLSLAIAKAKEVASLGASLLCVAGGVQLVQELYRETIPTWLLSSKEEKLGEANAVSCVMEGYAMAYLVILSGSIEWGIGDNLPSRTLSRRARIVGSHMDFLAGVLEGNISLGCDPATWKAYVSCLVGLMVNFAPVWIREVKVETLRKLASGLRGWHECELALSLLERGGPSAIGSAAELVYVLDGV
Length1323
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy0.144
Instability index47.71
Isoelectric point7.03
Molecular weight144146.71
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14428
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     127.65|      39|     370|     676|     715|       1
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  604-  654 (33.11/13.18)	.....LCG......ASLKsgwniqehvvhfvvkllspPVPPNYS..GS..RSHLidYMSMLSALLF
  676-  714 (68.84/43.64)	ASLITLCEVF....GSLK...................PASSNKSSIGD..ESSV..YMVFSLAFLF
  738-  770 (25.70/10.69)	GGVLTLEYLLllrnGHTA...................PARNETNSSGDqlES..............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     311.56|     103|     370|      74|     223|       2
---------------------------------------------------------------------------
   74-  205 (143.27/137.65)	SGLLCPLHvlSILSSRVVPHRRAqpeayrlYLELLRRYAFsfgpLAGdasKEKITESIDAALQLSQTFKVHVvelgHALVLF........FFSVIIslidstldDWGFKMTSRkRPRSAF...............GGS......DNDMEIDSMESQNLKIK
  245-  341 (129.55/88.54)	ER............................FNGLLQRLRF....LKG...RQLASSDLNSALQLLARLSANI....HSVVGFkhqlnkhrLFGVLL........DIGSRKPVF.HCNSGF...............GHStcwvrfDIYME.NAMDGKQLSIK
  461-  507 (38.74/10.08)	SGLLCPPS..SVVNSSNIAATKA.................................................................................................arfvlnsknekdasgGGS......DVDTSIKS.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     292.08|     105|     370|     841|     950|       3
---------------------------------------------------------------------------
  841-  931 (136.71/86.77)	.................................ISGS.PADTGEDMCQRPLLPAWEILEA.IPF...VLEA.ILTACAYGRLSSR.DLTTGLrdLVEF.............LPASLAAIIS............YFSAevTRGIWKQVAMNGIDWPS
  932- 1006 (66.15/36.90)	PAAILQSVESEIKEIlNAV...............................................................................gvnvpscgistvmLPLPLAALVSltitfkleksleYIHA..VAGLALENCASGCPWPS
 1175- 1271 (89.22/46.98)	PTWLLSSKEEKLGEA.NAVscvmegyamaylviLSGSiEWGIGDNLPSRTLSRRARIVGShMDFlagVLEGnISLGCDPATWKAYvSCLVGL..MVNF.............AP...........................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.02|      53|      65|    1028|    1091|       5
---------------------------------------------------------------------------
 1028- 1091 (76.15/81.44)	SCsRS..VFRQNKDAV........AQLLRSCfssflgslhASTSSLSSQSSvNGLLGFTIADIGACPSVAPGFL
 1095- 1157 (74.87/50.82)	SC.RTihVVQHVNDVIvglvaeyaAKLAERC.........ASTDSPRLKSS.QASLSLAIAKAKEVASLGASLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.90|      15|     341|     374|     388|       6
---------------------------------------------------------------------------
  374-  388 (27.90/18.05)	LRLVQRERDPLEGPI
  716-  730 (31.00/20.92)	LRLWKFYRPPLEQYI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14428 with Med33 domain of Kingdom Viridiplantae
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