<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14426

Description Uncharacterized protein
SequenceMEVKKIQALSFTFLLLFISEFLCGIASAAGGSSKVGTVIGIDLGTTYSCVGVYKNGNVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAPLNAERTIFGVKRLIGRKFDDPEVQRDIKFLPYKVVNKDGKPYIQVKVKGETKVFSPEEISAMILGKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKEEKNILVYDLGGGTFDVSILSIDNGVFEVRSTSGDTHLGGEDFDHRVMDYFIKLIKKKYNKDISKDNKALGKLRKECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNLDLFKKTMGPVKKALEDAGLKKKDIHEIVLVGGSTRIPKVQQLLKDFFDGKEPNKGVNPDEAVAFGAAVQGGVLSGEGGDETKDLLLLDVAPLSLGIETAGGVMTKLIPRNTVIPTKKSQIFTTYQDQQTTVSIKVYEGERSLTKDCRLLGKFDLTGIAPAPRGVPQIEVTFEVDANGILQVRAEDKAAKRSQSITITNDKGRLSQEEIERMVKEAEEFAEEDNKVREKIDARNKLETYIYSMKSTINDKDKLADKIDSDDKEKIESTLKEALEWLDDNQNADKDDFDEKLKEVEAVCNPVIKQVYEKSGGASSADSQDEEEPNDEL
Length663
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-0.433
Instability index32.62
Isoelectric point5.23
Molecular weight73246.33
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
cytoplasm	GO:0005737	IBA:GO_Central
endoplasmic reticulum chaperone complex	GO:0034663	IBA:GO_Central
endoplasmic reticulum lumen	GO:0005788	IBA:GO_Central
membrane	GO:0016020	IBA:GO_Central
nucleus	GO:0005634	IBA:GO_Central

GO - Biological Function
ATP binding	GO:0005524	IBA:GO_Central
ATPase activity	GO:0016887	IBA:GO_Central
heat shock protein binding	GO:0031072	IBA:GO_Central
misfolded protein binding	GO:0051787	IBA:GO_Central
protein folding chaperone	GO:0044183	IBA:GO_Central
unfolded protein binding	GO:0051082	IBA:GO_Central

GO - Biological Process
cellular response to unfolded protein	GO:0034620	IBA:GO_Central
chaperone cofactor-dependent protein refolding	GO:0051085	IBA:GO_Central
endoplasmic reticulum unfolded protein response	GO:0030968	IBA:GO_Central
protein refolding	GO:0042026	IBA:GO_Central
ubiquitin-dependent ERAD pathway	GO:0030433	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14426
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     138.62|      26|      26|     573|     598|       1
---------------------------------------------------------------------------
  546-  571 (35.01/20.38)	ERMVKEAEEFAE......EDNKVREKIDARNK
  573-  598 (41.53/25.54)	ETYIYSMKSTIN......DKDKLADKIDSDDK
  599-  626 (27.08/14.11)	E....KIESTLKealewlDDNQNADKDDFDEK
  631-  656 (35.00/20.38)	EAVCNPVIKQVY......EKSGGASSADSQDE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     263.05|      92|     199|     207|     321|       2
---------------------------------------------------------------------------
  216-  321 (125.68/137.82)	GLDKKEEKNILVYD.....LG....GGTfdVSILSIDNGVFEVRSTSGDTHLggEDFDHRVMdyfIKLikkkY..NKDISKDNKALGKLR.KECERAKRALsSQHQVRVEIESlfDGV
  412-  515 (137.37/87.07)	GEGGDETKDLLLLDvaplsLGietaGGV..MTKLIPRNTVIPTKKSQIFTTY..QDQQTTVS...IKV....YegERSLTKDCRLLGKFDlTGIAPAPRGV.PQIEVTFEVDA..NGI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.00|      17|      20|      81|     100|       3
---------------------------------------------------------------------------
   81-  100 (22.06/25.27)	RLIGEaaKNQAPlNAERTI.F
  104-  121 (27.93/18.07)	RLIGR..KFDDP.EVQRDIkF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.43|      18|     187|     156|     175|       4
---------------------------------------------------------------------------
  138-  155 (28.09/23.90)	KVKGETKVFSPEEISAMI
  158-  175 (27.34/14.53)	KMKETAEAYLGKKIKDAV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14426 with Med37 domain of Kingdom Viridiplantae
Unable to open file!