<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14384

Description Uncharacterized protein
SequenceMKEKFEEVFDPFKNKCKTKKVETLVLEDDDPATGLLRFISESGINCLVLGSCSSNYITRKLKGPGVSQIVLRCAPHTCDVYVISRHRIIKNSDGSSSAIETSSASWMSTRDHKRGSSDISEHISGVRSFRVESTAHEAYGASPMSDLSYLSSEAFTRMGFSENASVDQETNHHNLGDKLATSSFHHQSSSVSSNTGRSYMQMEVEQLRLELQNTISMYKRACEELVRAQSKVQLLSSECLDEARRVDAALESEETLRKIAAEEKEKHLKAMKEIEEAKVLLAKEAYERQIAELNAMKESSEKKKLVDALFSRDRRYRRYSRNEIEVATSFFSEANVIGEGGYGKVYKCSLDHTPVAVKVLRPDAVNKREEFLKEVEILSQLHHPNIVLLLGACPEIGCLVYEYLENGNLEDYISQRNGKPSLPWTVRFRIVFEIACGLAFLHSSKVEPIVHRDLKPGNILLDRNYMSKIGDVGLAKLISNVVPDSITEYRESILAGTLFYMDPEYQRTGTVRPKSDLYAFGVIILQVLTARHPNRLIFIAENAMANGSFADILDDSVTDWPLAEAKELARVALRCSQLRCRDRPDLETEVLPVLKRLVGLADSSLKIDRNHVDAPSHYFCPILQEIMEDPHIAADGFTYEFRAIKAWLEKHNVSPVTRLRLKHSALTPNHTLRSAIQEWRTHVTYPST
Length688
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.365
Instability index53.83
Isoelectric point6.47
Molecular weight77678.51
Publications
PubMed=23525075

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14384
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     176.52|      62|     146|     313|     385|       1
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  313-  385 (85.30/88.51)	DRRYrrYSR.NEIEVAtSFFSeaNVIGEG..GY......GKVYkcSLDHTPVAVKVLRPdavnKREEFLKEVEILSQL..HHPN
  462-  534 (91.22/59.94)	DRNY..MSKiGDVGLA.KLIS..NVVPDSitEYresilaGTLF..YMDPEYQRTGTVRP....KSDLYAFGVIILQVLtaRHPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.43|      21|     350|      44|      64|       2
---------------------------------------------------------------------------
   44-   64 (37.91/23.10)	INC...LV...LGSCS.SNYITRKLKGP
  396-  420 (26.73/14.36)	IGC...LVyeyLENGNlEDYISQRNGKP
  434-  456 (28.78/15.96)	IACglaFL...HSSKV.EPIVHRDLK.P
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14384 with Med32 domain of Kingdom Viridiplantae
Unable to open file!