<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14374

Description Uncharacterized protein
SequenceMMAVSVQQPLSHLWDTVLQLTKSAQDKNSDPLLWAVQLSNSLNSAGVALPSVELAHLLVSHICWANHVPITWKFLEKALTVKIVPPMLVLALLSTKVVPNRQLHPAAYRLYMELLKRHTFLFASQLNGPNCQKIIKSIDDVLHLSQLYGLQVCEPGVVIVEFVFSIIWQLLDASLDDEGLLELTPDKKSRWSTRPEDMEIDGHDCFNEKRSEQNEGLQKANTAMAIEIIVEFLQNKVTSRILCLTRRNLPSHWGGFIQKMQVLAANSSVLRTLKHITPESLLQLTSDTRRLLTRECKIISRQGFHAVLSSGSLRSSASQSHGVSSSAFWLPIDLFLEDAMDGSEVAIISAVETLTGLVKALQAVNSTTWHNAFLGLWIAALRLVQRERDPREGPVPRLDTCLCMLLSITTLAVTNIIEEEEAQLMEEIEGDRTNQRKEQAPGKRREGLIMCLQRLGDYETLLTPPQSVCSVVNQAAAKAIMYRSGLTVSNGYYESVSVNDVPINCMGNLRHLIVEACIARNLLDTSAYFWPGYVSARSSQVLRNVPGQVPGQVPGWSSIMKGSPLTPSLVNALVATPASSLAEIEKIYEIAVNGSDEEKISAVTILCGASLIRGWNIQEHICLFIINLLSPPVPADYSGSDSHLISYASFFNVLLVGVSSIDTVQIFSLLGLVPLLAAALMPICEVFGSSVPNISWTPTTGEELSCHAVFSNAFTLLLRLWRFDHPPLEHVMGDLPTVGNQVGPEYLLVLRNSRLASLGNSPMDRIKSRRVSKFITFPSETITMDRFPKLKLWYQQHQKCICSTLSGLVPGTPVHQIVDALLTMMFRKINRSSQPLTPATSGSSNSSASGTDESSIRLKVPAWDILEATPFVLDAALTACAHGRLSPRELATGLKELADYLPATLATMVSYFSAEVTRGIWKPACMNGTDWPSPAANLSIVEQQIKKILAATGVDVPSLAVGGSAPAMLPLPFAALVSLTITYKLDRASERALTLIGPALNSLAAGCPWPCMPILASLWAQKVKRWSDYLVFTASQTVFHHNGDAVVQLLKSCFTSTLGLSSSRAYSNGSVGALLGHGFGSHFSGGISPVAPGILYLRVHRSVRDVMFMTEEVLSLLMFSVRDIASCGLPRDRVDRLKKIKHGMRYGQVSLAAAMARVRIAATLGATLVWISGGSNLVQSLIKETLPSWFISTHGLDQEGRESGGMVAMLGGYALAYFAVLCGTFAWGVDSVTPASKRRPKVLGAHLEFLASALDGKISLGCDWAMWRAYVSGFVSLMVACTQKWVLEVDVEVLKRLSKELRRLNEEELALALLGLGGVGAMGAAAELAIECEV
Length1334
PositionTail
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy0.184
Instability index46.77
Isoelectric point7.15
Molecular weight145484.07
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14374
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     233.41|      75|     129|     891|     971|       1
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  891-  971 (117.26/97.37)	ATG................LKELADYLPATLATMVSYFSAEVTRGIWKpACMNGTDWPSPAANLSivEQQIKKILaatGVDVPSLAVGG...SAPAMLPL
 1004- 1097 (116.15/78.03)	AAGcpwpcmpilaslwaqkVKRWSDYLVFTASQTVFHHNGDAVVQLLK.SCFTSTLGLSSSRAYS..NGSVGALL...GHGFGSHFSGGispVAPGILYL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.05|      31|     129|     501|     567|       2
---------------------------------------------------------------------------
  243-  278 (52.11/14.90)	CLTRRNLPS...HWGGFIQkmqvlAANSSVLRTLKHITP
  517-  550 (52.94/49.12)	CIARNLLDTsayFWPGYVS.....ARSSQVLRNVPGQVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.67|      16|     114|    1204|    1222|       4
---------------------------------------------------------------------------
 1204- 1222 (22.37/24.44)	GGMVAMlGgyALAYFAVLC
 1317- 1332 (30.30/18.10)	GGVGAM.G..AAAELAIEC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.82|      38|     528|     291|     332|       7
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  291-  332 (58.16/40.13)	LLTRECKIISR..QGFHAVlSSGSLRSSASqshGVSSSAFWLPI
  821-  860 (61.66/31.67)	LLTMMFRKINRssQPLTPA.TSGSSNSSAS...GTDESSIRLKV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14374 with Med33 domain of Kingdom Viridiplantae
Unable to open file!