<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14373

Description Uncharacterized protein
SequenceMANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVVPAPHSQEFISVASQNFQHVGRGVPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQPNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQVTPLQYTGERPAVTSSIAPETGVRPNSAGGTVAEWREHTSAEGRRFYYNRRTGLSTWEKPFELMTPLERADASTNWKEFTSPDGRKYYYNKVTKESRWIMPEELKLARELVEKAPVKEMQQEMLVNHHAPVTVSPPVAEADTLVNAAQVASSPVSVAPVIATGDGDVQTAAASRSSTSPVVASPVIENPNGVHTPVVVPSSTVSSVEAAVTINDTVAEPMESSNNLSAQDFVSSADGVLVQENEEAMDDVTGKKMNDIASEEKPVDREPISYENKLEAKDAFKALLESTNIGSDWTWDRAMRVIINDKRYGALKTLGERKQAFNEFLVQRKKQEAEERRIKQKKAREEFKKMLEECSELTSSTRWGKVESIFEHDERFKAVERDRDRRDMFENYVEELQKKERAKAMEERKHNIMEYRQFLESCDFIKASSQWRKVQDRLEADERCSRLEKIDRLEIFQEYLRDLEKEEEEQRRIQKEELRKTERKNRDDFRKLMEEHLAAGTLTAKSHWRDYCMKVKDLPTYLAVASNTSGSTPKDLFEDVVEELQKQYHEDKTRIKDAVKLGKVMLTSTWKLEDFKTVISNDIGSPPISDANLKLVFDELLERVKEKEEKEAKKRKRLADDFSHLLSSIKEITPSSKWEDYKSLLEGSQECSAIGEESFCKEIFDKHVMQLKEQAKEKERKRKEEKEKKEKERDDRERRRTKQRREKEVEYEREREERLKKDGLDSEIADVMDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSSDHKKSRRQAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
Length1012
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-1.059
Instability index58.14
Isoelectric point6.46
Molecular weight115951.11
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14373
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      97.90|      17|      17|      69|      85|       1
---------------------------------------------------------------------------
   22-   35 (18.77/ 7.27)	DPPRSL......P.....PMSfQFR
   69-   85 (38.57/23.60)	PPPTHQ......PQFSQ.PMQ.QLP
   86-  102 (22.95/10.72)	PRSG.Q......PGHGMlPSQ.AIP
  119-  140 (17.61/ 6.31)	PQPNSQgpnnamPNLGG.PRT.PL.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     553.25|      66|      66|     528|     593|       2
---------------------------------------------------------------------------
  462-  525 (76.88/44.63)	.FKALL.E...STNIGSDWTWDRAMRVII.NDKRYGALKTLGE...RKQAFNEFLVQRKKQE....AEERRI....KQKKA
  528-  593 (104.53/63.56)	EFKKMLEE...CSELTSSTRWGKVESIFE.HDERFKAVERDRD...RRDMFENYVEELQKKE....RAKAME....ERKHN
  596-  667 (80.32/46.99)	EYRQFLES...CDFIKASSQWRKVQDRLE.ADERCSRLEK.ID...RLEIFQEYLRDLEKEEeeqrRIQKEElrktERK.N
  670-  736 (74.84/43.23)	DFRKLMEEhlaAGTLTAKSHWRDYCMKVK.DLPTYLAVASNTSgstPKDLFEDVVEELQKQ.........YH....EDKTR
  742-  800 (73.59/42.37)	KLGKVM........LTSTWKLEDFKTVIS.NDIGSPPI.SDAN...LKLVFDELLERVKEKE....EKEA.K....KRKRL
  803-  865 (88.11/52.32)	DFSHLLSS...IKEITPSSKWEDYKSLLE.GSQECSAIGEESF...CKEIFDKHV..MQLKE....QAKE.K....ERKRK
  892-  943 (54.98/29.63)	EYEREREE.....RLKKDGLDSEIADVMDiHDSK....EKKRS...GKD..DN......KKH....RKRHHS....DEDH.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      79.06|      17|      17|     235|     251|       3
---------------------------------------------------------------------------
  235-  251 (31.83/15.88)	STWEKPFELMTP...LERAD
  276-  295 (21.60/ 8.73)	SRWIMPEELKLArelVEKAP
  305-  321 (25.62/11.54)	VNHHAPVTVSPP...VAEAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      91.00|      18|      19|     379|     396|       4
---------------------------------------------------------------------------
  331-  347 (16.20/ 6.52)	...SSPV.SVAPVIATG.DgDV
  354-  372 (23.45/12.87)	R..SSTSPVVASPVIENpN.GV
  379-  396 (28.22/17.04)	P..SSTVSSVEAAVTIN.D.TV
  399-  418 (23.14/12.59)	PmeSSNNLSAQDFVSSA.D.GV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.34|      19|      38|     214|     232|       5
---------------------------------------------------------------------------
  214-  254 (26.55/13.79)	EWREHTSAEGRRFYYNRRtglstwekpfelmtpleradasT
  255-  273 (39.79/24.30)	NWKEFTSPDGRKYYYNKV......................T
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.75|      26|      32|     951|     979|       6
---------------------------------------------------------------------------
  951-  979 (44.26/33.26)	RSKRSH..GS..SSDHKKsrrQAPGHESDT.ESR
  982- 1012 (36.50/19.42)	RHKRDHrnGSrrSGDHDE...LEDGEFGDVgESR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.24|      13|      24|     143|     164|       7
---------------------------------------------------------------------------
  143-  155 (27.19/ 9.84)	SYTFAP..SSYGQM.P
  168-  183 (16.04/10.79)	SQLHAPnvSSEGQVtP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14373 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) APVIATGDGDVQTAAASRSSTSPVVASPVIENPNGVHTPVVVPS
2) ENEEAMDDVTGKKMNDIASEEKPVDREPISY
3) GRGVPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQPNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQVTPLQYTGERPAVTSSIAPETGVRPNSAGGTVAEWR
4) MANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVV
5) QLKEQAKEKERKRKEEKEKKEKERDDRERRRTKQRREKEVEYEREREERLKKDGLDSEIADVMDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSSDHKKSRRQAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
337
422
58
1
852
380
452
216
38
1012










Molecular Recognition Features






MoRF SequenceStartStop




NANANA