<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14371

Description Uncharacterized protein
SequenceMANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVVPAPHSQEFISVASQNFQHVGRGVPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQPNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQVTPLQYTGERPAVTSSIAPETGVRPNSAGGTVAEWREHTSAEGRRFYYNRRTGLSTWEKPFELMTPLERADASTNWKEFTSPDGRKYYYNKVTKESRWIMPEELKLARELVEKAPVKEMQQEMLVNHHAPVTVSPPVAEADTLVNAAQVASSPVSVAPVIATGDGDVQTAAASRSSTSPVVASPVIENPNGVHTPVVVPSSTVSSVEAAVTINDTVAEPMESSNNLSAQDFVSSADGVLVQENEEAMDDVTGKKMNDIASEEKPVDREPISYENKLEAKDAFKALLESTNIGSDWTWDRAMRVIINDKRYGALKTLGERKQAFNEFLVQRKKQEAEERRIKQKKAREEFKKMLEECSELTSSTRWGKVESIFEHDERFKAVERDRDRRDMFENYVEELQKKERAKAMEERKHNIMEYRQFLESCDFIKASSQWRKVQDRLEADERCSRLEKIDRLEIFQEYLRDLEKEEEEQRRIQKEELRKTERKNRDDFRKLMEEHLAAGTLTAKSHWRDYCMKVKDLPTYLAVASNTSGSTPKDLFEDVVEELQKQYHEDKTRIKDAVKLGKVMLTSTWKLEDFKTVISNDIGSPPISDANLKFQSLPVKLPGYMLDDELCSTLWDELVFDELLERVKEKEEKEAKKRKRLADDFSHLLSSIKEITPSSKWEDYKSLLEGSQECSAIGEESFCKEIFDKHVMQLKEQAKEKERKRKEEKEKKEKERDDRERRRTKQRREKEVEYEREREERLKKDGLDSEIADVMDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSSDHKKSRRAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
Length1035
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-1.034
Instability index58.41
Isoelectric point6.24
Molecular weight118605.12
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14371
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.72|      16|      17|      69|      85|       1
---------------------------------------------------------------------------
   69-   85 (31.77/17.66)	PPPThQPQFSQ.PMQQLP
   86-  102 (22.95/ 7.89)	PRSG.QPGHGMlPSQAIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     213.86|      39|      40|     205|     243|       2
---------------------------------------------------------------------------
  139-  170 (36.84/20.20)	PL.SSSYTFA.....PSSYGqmpRSF......NDSTqYQSISQL
  173-  194 (31.50/16.16)	PNvSSEGQVTPLQ.............Y....TG.....ERPAVT
  205-  243 (75.53/49.47)	PN.SAGGTVAEWREHTSAEG...RRFYYNRRTGLST.WEKPFEL
  246-  284 (69.99/45.28)	PL.ERADASTNWKEFTSPDG...RKYYYNKVTKESR.WIMPEEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     458.69|      64|      65|     528|     591|       3
---------------------------------------------------------------------------
  462-  523 (72.45/35.96)	.FKALL.E...STNIGS.....DWTWDRAMRVIINDKRYGALK........TLGE...RKQAFNEFL.VQRKK.....QE....AEERRIKQK
  528-  591 (105.85/55.71)	EFKKMLEE...CSELTS.....STRWGKVESIFEHDERFKAVE........RDRD...RRDMFENYV.EELQK.....KE....RAKAMEERK
  596-  662 (84.91/43.33)	EYRQFLES...CDFIKA.....SSQWRKVQDRLEADERCSRLE........K.ID...RLEIFQEYL.RDLEK.....EEeeqrRIQKEELRK
  670-  738 (57.20/26.94)	DFRKLMEEhlaAGTLTA.....KSHWRDYCMKVKDLPTYLAVA........SNTSgstPKDLFEDVV.EELQKqyhedKT....RIK......
  745-  817 (51.75/23.72)	..KVMLTS...TWKLEDfktviSNDIGS.PPISDANLKFQSLPvklpgymlDDEL...CSTLWDELVfDELL.......E....RVKEKEEKE
  827-  887 (86.55/44.30)	DFSHLLSS...IKEITP.....SSKWEDYKSLLEGSQECSAIG........EESF...CKEIFDKHV...MQL.....KE....QAKE.KERK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     113.03|      22|      23|     970|     991|       4
---------------------------------------------------------------------------
  916-  948 (20.06/ 7.04)	EYEREREERlkKDGLDSeiadvmdihDSKE.KKR
  970-  991 (38.55/21.08)	GNENDRSKR..SHGSSS.........DHKK.SRR
  994- 1016 (31.45/15.69)	GHESDTESR..HRRHKR.........DHRNgSRR
 1018- 1035 (22.97/ 9.26)	G...DHDEL..EDGEFG.........DVGE.SR.
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.29|      17|      18|     304|     320|       5
---------------------------------------------------------------------------
  296-  316 (26.64/15.58)	VKEMqqemLVN....HHAPVTVSPP
  317-  339 (16.65/ 7.01)	VAEA..dtLVNaaqvASSPVSVAPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.84|      11|      15|     888|     898|       6
---------------------------------------------------------------------------
  888-  898 (17.86/ 8.61)	RKEEKEKKEKE
  904-  914 (18.98/ 9.66)	RRRTKQRREKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.97|      19|      33|     361|     380|       7
---------------------------------------------------------------------------
  359-  378 (29.53/22.19)	PV...............VASPvIENPNGVHTPVVV
  379-  412 (23.44/12.17)	PSstvssveaavtindtVAEP.MESSNNLSAQDFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      84.48|      17|      17|     104|     120|       8
---------------------------------------------------------------------------
   24-   40 (27.72/13.53)	PRSL.PPMSFQFRPVVPA
  104-  120 (31.70/16.49)	PVSQ.PNRNFASELPLPQ
  121-  137 (25.06/11.54)	PNSQgPN.NAMPNLGGPR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14371 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) APVIATGDGDVQTAAASRSSTSPVVASPVIENPNGVHTPVVVPS
2) ENEEAMDDVTGKKMNDIASEEKPVDREPISY
3) GRGVPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQPNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQVTPLQYTGERPAVTSSIAPETGVRPNSAGGTVAEWR
4) LKEQAKEKERKRKEEKEKKEKERDDRERRRTKQRREKEVEYEREREERLKKDGLDSEIADVMDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSSDHKKSRRAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
5) MANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVV
337
422
58
877
1
380
452
216
1035
38










Molecular Recognition Features






MoRF SequenceStartStop




NANANA