<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14367

Description Uncharacterized protein
SequenceMANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVVPAPHSQEFISVASQNFQHVGRGVPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQPNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQVTPLQYTGERPAVTSSIAPETGVRPNSAGGTVAEWREHTSAEGRRFYYNRRTGLSTWEKPFELMTPLERADASTNWKEFTSPDGRKYYYNKVTKESRWIMPEELKLARELVEKAPVKEMQQEMLVNHHAPVTVSPPVAEADTLVNAAQVASSPVSVAPVIATGDGDVQTAAASRSSTSPVVASPVIENPNGVHTPVVVPSSTVSSVEAAVTINDTVAEPMESSNNLSAQDFVSSADGVLVQENEEAMDDVTGKKMNDIASEEKPVDREPISYENKLEAKDAFKALLESTNIGSDWTWDRAMRVIINDKRYGALKTLGERKQAFNEFLVQRKKQEAEERRIKQKKAREEFKKMLEECSELTSSTRWGKVESIFEHDERFKAVERDRDRRDMFENYVEELQKKERAKAMEERKHNIMEYRQFLESCDFIKASSQWRKVQDRLEADERCSRLEKIDRLEIFQEYLRDLEKEEEEQRRIQKEELRKTERKNRDDFRKLMEEHLAAGTLTAKSHWRDYCMKVKDLPTYLAVASNTSGSTPKDLFEDVVEELQKQYHEDKTRIKDAVKLGKVMLTSTWKLEDFKTVISNDIGSPPISDANLKLVFDELLERVKEKEEKEAKKRKRLADDFSHLLSSIKEITPSSKWEDYKSLLEGSQECSAIGEESFCKEIFDKHVMQLKEQAKEKERKRKEEKEKKEKERDDRERRRTKQRREKEVEYEREREERLKKDGLDSEIADVMDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSSDHKKSRRAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
Length1011
PositionUnknown
OrganismPrunus persica (Peach) (Amygdalus persica)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.06
Grand average of hydropathy-1.056
Instability index58.00
Isoelectric point6.46
Molecular weight115822.98
Publications
PubMed=23525075

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process
mRNA cis splicing, via spliceosome	GO:0045292	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14367
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.29|      17|      17|      69|      85|       1
---------------------------------------------------------------------------
   22-   35 (18.77/ 6.17)	DPPRSLP.....PMSfQFR
   69-   85 (38.57/20.06)	PPPTHQPQFSQ.PMQ.QLP
   86-  102 (22.95/ 9.10)	PRSG.QPGHGMlPSQ.AIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.26|      16|      17|     858|     874|       2
---------------------------------------------------------------------------
  863-  878 (26.38/10.54)	KRKEEKEKKEKERD.DR
  879-  895 (19.87/ 9.99)	ERRRTKQRREKEVEyER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     497.25|      64|      65|     528|     591|       3
---------------------------------------------------------------------------
  462-  523 (78.95/56.44)	.FKALL.E...STNIGSDWTWDRAMRVIINDKRYGALKTLGE...RKQAFNEFLVQRKKQE....AEERRIKQK
  528-  591 (100.99/74.78)	EFKKMLEE...CSELTSSTRWGKVESIFEHDERFKAVERDRD...RRDMFENYVEELQKKE....RAKAMEERK
  596-  662 (83.85/60.51)	EYRQFLES...CDFIKASSQWRKVQDRLEADERCSRLEK.ID...RLEIFQEYLRDLEKEEeeqrRIQKEELRK
  670-  734 (75.55/53.61)	DFRKLMEEhlaAGTLTAKSHWRDYCMKVKDLPTYLAVASNTSgstPKDLFEDVVEELQKQ.........YHEDK
  742-  798 (74.42/52.67)	KLGKVM........LTSTWKLEDFKTVISNDIGSPPI.SDAN...LKLVFDELLERVKEKE....EKEA.KKRK
  803-  862 (83.49/60.21)	DFSHLLSS...IKEITPSSKWEDYKSLLEGSQECSAIGEESF...CKEIFDKHV..MQLKE....QAKE.KER.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      27.60|      13|      19|     104|     121|       4
---------------------------------------------------------------------------
  114-  130 (14.72/ 7.38)	SELPLPQ.pnSqgPN.NAM
  131-  147 (12.88/10.03)	PNLGGPRtplS..SSyTFA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      80.23|      16|      17|     928|     943|       5
---------------------------------------------------------------------------
  928-  943 (31.01/17.07)	DDNKKHRKRHHSDEDH
  947-  962 (25.51/12.61)	NENDRSKRSHGSSSDH
  974-  986 (23.71/11.15)	DTESRHR.RHKR..DH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      79.06|      17|      17|     235|     251|       6
---------------------------------------------------------------------------
  235-  251 (31.83/19.95)	STWEKPFELMTP...LERAD
  276-  295 (21.60/10.96)	SRWIMPEELKLArelVEKAP
  305-  321 (25.62/14.49)	VNHHAPVTVSPP...VAEAD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      91.00|      18|      19|     379|     396|       7
---------------------------------------------------------------------------
  331-  347 (16.20/ 6.99)	...SSPV.SVAPVIATG.DgDV
  354-  372 (23.45/13.80)	R..SSTSPVVASPVIENpN.GV
  379-  396 (28.22/18.29)	P..SSTVSSVEAAVTIN.D.TV
  399-  418 (23.14/13.51)	PmeSSNNLSAQDFVSSA.D.GV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.34|      19|      38|     214|     232|       8
---------------------------------------------------------------------------
  214-  254 (26.55/12.87)	EWREHTSAEGRRFYYNRRtglstwekpfelmtpleradasT
  255-  273 (39.79/22.55)	NWKEFTSPDGRKYYYNKV......................T
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.04|      17|      24|     163|     183|       9
---------------------------------------------------------------------------
  163-  183 (27.39/29.15)	QYQSISqlhaPNVSS....EGQVTP
  185-  205 (25.64/15.59)	QYTGER....PAVTSsiapETGVRP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14367 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) APVIATGDGDVQTAAASRSSTSPVVASPVIENPNGVHTPVVVPS
2) ENEEAMDDVTGKKMNDIASEEKPVDREPISY
3) GRGVPLMNVRLPPPTHQPQFSQPMQQLPPRSGQPGHGMLPSQAIPLPVSQPNRNFASELPLPQPNSQGPNNAMPNLGGPRTPLSSSYTFAPSSYGQMPRSFNDSTQYQSISQLHAPNVSSEGQVTPLQYTGERPAVTSSIAPETGVRPNSAGGTVAEWR
4) MANNPQFSGLQPLRPPMVGSVDPPRSLPPMSFQFRPVV
5) QLKEQAKEKERKRKEEKEKKEKERDDRERRRTKQRREKEVEYEREREERLKKDGLDSEIADVMDIHDSKEKKRSGKDDNKKHRKRHHSDEDHANGNENDRSKRSHGSSSDHKKSRRAPGHESDTESRHRRHKRDHRNGSRRSGDHDELEDGEFGDVGESR
337
422
58
1
852
380
452
216
38
1011










Molecular Recognition Features






MoRF SequenceStartStop




NANANA