<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14340
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSQINSQTTQATVMATVPLHIEPLQGAQSLVGIKSILDRVLERIHGEFDVLLQHGPSLNDSDRKRNLLLHLHATRQQLMRLLALVQWSPKAKALTECVDQDKVLDQAAGHARLIHAAVDDMCAAHLERLGRFNPMSDVQTALEVLSTGNYRDLPSSIEKLRPEGPIPLSAKRVRLRRITHIIYSQLMKTQLPDRVQVVEVLDGYVILRAPGLYEAKVHRYSSYEAKMTLSPLLEVPDAPSIRGKLKTELPLKHVTDTDVAAQVGHPPASAADNNHDEEEDGVTSGPKPQRWLWVLISFELLPNSLRRKPLGNAQVTHLLENLNMRMSLAADAAAYEKLRRNSYRSATPAAVSVAEDAMDADERVDTAAPSSSAMAAGLSESHALSGHSSRSRSLASSAPATGTSSMMAGAAGCTGQFKANVESMRLHAADESTMPVLVAHSLLSDISMRLLLDAIRAAAEGLLAERWSGDHLEIQPAVTLMPGIRLMYWRQATPLTILLTPDSIPAVVASTVNLGNTQSRYSSQLLSSSLTGGGLHHLEIGIDQSGSPIVTHLPQLQHVNLKHGDKWSGALTSATMHEVQQMGAVSEASQSEPVVVQAPELSLNSAAVNVDELLLLASAHVACLELSILRAGIQACLQKGATASAPLFTLRIAALPLPWIRRQVGDMVRETLTEAAVKAGHSPAAADVGGGFEGAVSTHPHLVDFASASSRGPPPLHPHHFIVECPVLEVHVEDMLLMKVSKNLITGRILLHAGTAVSSDFHISSHQATFKMEEEINKLAADAYREASTLPPSSASSSASITPDSLAEVGAAKAVRVISLYLARIFLEQYRRVGLIRFISMARRLQLHSQGVGKAMMADQIKHFPWLNPSRSSLDWASVPILLPPSYPPLPARHTEPLNHHASTPTGEARGLYWLLSTEHPSGSFSTGTRPSYYLIILSCTLQGEPLQVLKVVSVPPAIYMTSPPGRLPHVSEIEGVKSEHTSFEDQDEDVRNRRGSVLCASELVLGSGDSLASLQELQMQPMSSSLIQHPTTLSGHDWTPVMTSPSPGLPSEPAAGSTIPLSALPLSYPHGQPEGDSSTFIKNGFEGEVKSVIAWCKSHMQWETMLCQFQSLGVRFVESMSGASPNTVVLESLLGDVPLPHVISRACLHSTEDEGAGSTLATSSLSIHFVHVRLDTHSISQQSSFSSVTSTSGSEAHGFIATISGRFLADSSSSSSLITRRGAVGEDQWRSLGSEQTVPCHAHSSGRTWQAELRGAMHCMCTTANMVLAGRDSCLSSSLPPLQLVYSFHHGHSVLDLLQDLASILRMQEMLSELERMGKVSRVLRVVNHGMETIPWSKDAPTLPRTQEDFMDSDVDGSVSLRRVHVAANGLDSFRDTIIKAEEVNVKLEESPCNMLSRKRGREDSWPHENGNGENHHPHHPVVSTEKVKPMLNDTSLEVNMSREKAFSKEPYPHTLFWMWPKNGSVELLHYGYFSAVLQYKPPDDIPTSEHTPLVSSASRALHLFFHWRPATQPKILVPFQEGEAGVSTSSASSCCAVSCCIRATFSANMEACNGLDQQMSALPEVVLSSYQDMADMGEFGLMMDALVITVSPMSQLVASAAKTTQSSSHSSSGYLPQPVLLQSHPPFQHRMLISLPCADSSSPSHSAYITVDLFCTATGQSWLKLCEANCLDNVEGQDYLLRAKREEAGLRAVRKVLAGYPQEYLTLGRARSYETDMSAPLTREWGISSTANRGLWVLVHTQRLQEVLQSVKEVISCLQG |
Length | 1762 |
Position | Tail |
Organism | Chlamydomonas eustigma |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Chlorophyceae>
CS clade> Chlamydomonadales> Chlamydomonadaceae> Chlamydomonas.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -0.144 |
Instability index | 53.27 |
Isoelectric point | 6.16 |
Molecular weight | 191391.57 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP14340
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 394.34| 113| 161| 791| 911| 1
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446- 519 (46.50/17.90) .................................................ISM..RLLLDAiRAAAEGLLAerwsgDH.LEIQPavT.....LMPGI.RLMYWrqaTPLTILLTP..DSIP....AvvASTVNLGN.TQS........
791- 911 (181.40/119.21) PPSSASSSasiTPDSLAEVGAAKAVRviSLYLAriFLEQYRRVGLIR.FISMARRLQLHS.QGVGKAMMA.....DQ.IKHFP..W.....LNPSR.SSLDW...ASVPILLPPSyPPLP....A..RHTEPLNH.HASTPTGEARG
956- 1076 (166.43/90.86) PPAIYMTS...PPGRLPHVSEIEGVK..SEHTS..FEDQDEDVRNRRgSVLCASELVL....GSGDSLAS.....LQeLQMQP..MsssliQHPTTlSGHDW...T..PVMTSPS.PGLPsepaA..GSTIPLSAlPLSYPHGQPEG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 342.87| 101| 907| 621| 726| 2
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104- 185 (90.26/51.93) ...................................LDQAAGHA......RLIHAAVD...DMCAAHLE....RLGRFNP.MSDVQTALE...VLST.GNYRDLPSSIEKlrpeGPIPLSAKRvrlrritHIIYSQ
195- 288 (84.62/49.16) VQVVEVldgyVILRApGLyEAKVHRYSSYEA.....KMTLSPLlevpdaPSIRGKLKtelPLKHVTDTDVAAQVGHPPAsAADNNHDEEedGVTS..................GPKP..................
621- 726 (167.99/120.26) VACLEL....SILRA.GI.QACLQKGATASAplftLRIAALPL......PWIRRQVG...DMVRETLTEAAVKAGHSPA.AADVGGGFE..GAVSThPHLVDFASASSR....GPPPLHPHH.......FIVECP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 133.58| 42| 45| 1366| 1409| 3
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1368- 1409 (72.28/43.59) AANGLDSF.RDTIIKAEEVNVKLEESPCNM.LSRKRG.REDSWPH
1411- 1455 (61.29/30.49) NGNGENHHpHHPVVSTEKVKPMLNDTSLEVnMSREKAfSKEPYPH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.94| 39| 46| 1158| 1198| 4
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1158- 1198 (57.38/43.89) GSTLATSSLSIHFVHvRLDTHSISQQSSFSSvTSTSGSEAH
1206- 1244 (69.56/44.16) GRFLADSSSSSSLIT.RRGAVGEDQWRSLGS.EQTVPCHAH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.79| 32| 696| 533| 564| 5
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533- 564 (58.46/35.60) GGLHHL....EIGIDQSGSPIVTHLPQLQHV.NLKHG
1256- 1292 (50.33/29.49) GAMHCMcttaNMVLAGRDSCLSSSLPPLQLVySFHHG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.35| 25| 696| 921| 945| 6
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921- 945 (45.27/28.59) PSGSFSTGTRPSYYLIILSCTLQGE
1638- 1662 (46.08/29.25) PCADSSSPSHSAYITVDLFCTATGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.11| 18| 1444| 289| 306| 8
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289- 306 (33.80/20.97) QRWLWVLISFELLPNSLR
1734- 1751 (32.31/19.71) NRGLWVLVHTQRLQEVLQ
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