<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14322
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDPVVLSNGGGPSHHGHGHGHGHGHGHGQGHGQGQGHGPSPTTASSSNPHIHSSSSSSSSWSLSSPAQPRSQPQPPLRVDSLSPSTSTTTTIPTLKLIHAQQHSRAQDDRSLDDELPTVTHDLIPLSHIVQRLVAQVHADLLNLTETQVAHKSHRLRAIVDYVLQTRRQLLKLLVLVRWSSQADALHKCMNIIGFLARQNFEFDHSVQGLHEVKEVLGGARVRNYDLTSALTVLSTGHYPFLPSVIPESFTQPLPLSDSTVLETLTQVDQILAYRLACLEKLPRAMQTYWIKDGRVGFRVERMWEAVFTYGGEQGKEEWYLLGVKFGFNVKDARGGERIRHCASLQRNIVVRLTCPSCSVHLVWSSEPSGPMKETILQLCNQELARHPATDSTSPPKSAHLVRAYNFLQRIALSYQLEAIASQASVLAQTKSIACVRCVRELDGRGLRVDYWLPKEGSSSTSGNAGSGSSAGGGGPRPIPTSTAPCLRFAYGQRDETRGTERIELMRRRALEKLLKSGGKEGKRKKATSAQTTASETRQEESMEEQEDVDDALSITWTVPPSTDAAVPIDTTAVDLTLDDSLDLETLLRRVTTRHVRSNVLELYEQLVNELDPNDLELVSSTNSNGPSIVDRDEEAQDEGVPQIKVHLYSSHYIVVSLSTLSGKLEFKAVGEATSLREARLRGAAEKVDRSRRLLGETLLRVRATTILDEVDTKAGYLGLTTTKRLPLKSNDMARFGSTTRGLLFIQLKGVSNGSNHGSQALAPASSFGWMSSAPSYYLVLVMNESGFRFALIGTREEADQMSAWTTIDEMGWIERGSVAAAGQQEGRTGFDVGIDDLGDLYAYCIKRIKFYIIESQLHLRRIPYQHVAPSVPPSSATASAPAATSLTPTSPYLVIHSSDLISSPTPVAHRNIAIHFLPPRSNSSTGRLGDAQDDQVVFLLKLKATLSPPSQHSYGARTHDDAPSQDLWPPNVLYSPLTNLLEFRFDDLETCVQNFLTAYGLVVKSVVMKRHRLLQIKRQDHAVSLVKAVMEAKVGGGEATTMTTTMTTTMTTTTTAATAGGARNR |
Length | 1066 |
Position | Tail |
Organism | Microbotryum intermedium |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Pucciniomycotina>
Microbotryomycetes> Microbotryales> Microbotryaceae> Microbotryum.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.336 |
Instability index | 47.08 |
Isoelectric point | 7.49 |
Molecular weight | 116622.25 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP14322
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 214.03| 71| 255| 537| 627| 1
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537- 627 (104.07/94.02) TRQE.ESMEEQEDVDDalsITWTVPPSTDAAVPIDT.TAVDLTLDDSLDLETL...............LRRVTTRHVRSNVlelyeqlvnelDPndlelvSSTNSNGP
795- 882 (109.96/64.26) TREEaDQMSAWTTIDE...MGWIERGSVAAAGQQEGrTGFDVGIDDLGDLYAYcikrikfyiiesqlhLRRIPYQHVAPSV...........PP......SSATASAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.15| 21| 22| 182| 203| 2
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183- 203 (36.48/31.33) ADALHKCMNIIGFLARQNFEF
207- 227 (32.67/20.97) VQGLHEVKEVLGGARVRNYDL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 35.49| 12| 23| 87| 98| 3
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87- 98 (19.99/10.85) STTTTIPTL..KLI
111- 124 (15.50/ 6.83) SLDDELPTVthDLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 125.39| 45| 842| 40| 109| 4
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40- 109 (58.95/64.26) SPTTASSSNPHIH..SSSSSSSSWSLSSpAQPrSQ.pqpplrvdSLSPststtttiptlklihAQQHS...RAQDD
904- 962 (66.44/38.04) SPTPVAHRNIAIHflPPRSNSSTGRLGD.AQD.DQvvfllklkaTLSP...............PSQHSygaRTHDD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.64| 15| 18| 275| 289| 5
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275- 289 (26.79/14.61) RLAC.LEKLPRAMQTY
295- 310 (21.86/10.80) RVGFrVERMWEAVFTY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 111.09| 35| 725| 235| 274| 6
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235- 274 (49.92/41.34) STGHYPflPSVIPESFTQPLPLS.DStvLETLTQvDQILAY
965- 1000 (61.17/33.81) SQDLWP..PNVLYSPLTNLLEFRfDD..LETCVQ.NFLTAY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.25| 15| 161| 325| 339| 8
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325- 339 (28.08/17.94) KFGFNVKD.ARGGERI
488- 503 (24.17/14.40) RFAYGQRDeTRGTERI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.93| 27| 522| 152| 178| 11
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152- 178 (43.56/25.32) KSHRLRAIVDYVLQTRRQLLKLLVLVR
677- 703 (43.38/25.18) REARLRGAAEKVDRSRRLLGETLLRVR
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