<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14205

Description Uncharacterized protein
SequenceMAGKGDGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFTDPSVQGDMKLWPFKVIAGPGDKPMIVVTYKGEEKQFAAEEISSMVLTKMREIAEAYLGTNVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDSKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIENMVQEAEKYKAEDEEHKKKIDAKNALENYAYNMRNTIKDEKIASKLPADDKKKIEDTIEGAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGSGGDMGGAMDEDGPAGGGSSGAGPKIEEVD
Length649
PositionUnknown
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.06
Grand average of hydropathy-0.440
Instability index33.12
Isoelectric point5.10
Molecular weight71077.62
Publications
PubMed=28654223

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14205
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.24|      18|      41|     337|     356|       1
---------------------------------------------------------------------------
  337-  356 (25.55/23.27)	VHDVVLVGGSTRipKVQQLL
  381-  398 (29.70/18.95)	VQAAILSGEGNE..KVQDLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     351.17|     122|     280|     200|     330|       2
---------------------------------------------------------------------------
  204-  330 (191.45/148.72)	FDLGG......GTFDVSL.LTIE.EGIFEVkaTAGD...............THLGGEDFDNrMVNHfVQEFK...RKHKKDISGNpRALR....RLRTAC..ERAKRTLSSTAQTTIE..IDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDS
  465-  620 (159.72/99.04)	FELSGippaprGVPQINVcFDIDaNGILNV..SAEDkttgqknkititndkGRLSKEEIEN.MVQE.AEKYKaedEEHKKKIDAK.NALEnyayNMRNTIkdEKIASKLPADDKKKIEdtIEGAIQWLDGNQLAEADEFEDKMKELESICNPIIAKMYQGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.27|      18|      21|      38|      55|       3
---------------------------------------------------------------------------
   16-   33 (19.08/ 9.54)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.67/21.09)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.52/14.17)	NQvaMNPTNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.65|      17|     189|     170|     188|       4
---------------------------------------------------------------------------
  170-  188 (22.56/28.14)	GLNVMRIINePTaAAIAYG
  362-  378 (32.09/25.62)	GKELCKSIN.PD.EAVAYG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14205 with Med37 domain of Kingdom Viridiplantae
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