<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14204

Description Uncharacterized protein
SequenceMAVVSPVPTLTQRISLSRLDHIGVAGIMASRGEIVPEPVPVAQIIEDKIYVAVGKDVKDSRMTLIWALQNSGGKKICVICVLVPAQKIPFMGTELPVNAVKEEKVREHRETERHDMDELLDEYLLTCKQMGVRAEKLYIEKDSIEKGMLELITLHGIRKLVMGAASGRRYSRRMTELKSKKAVYIRDEAPISCHIWFICNGHLIYTREGVVTDRAKADAEAEAEAEASTSALQMSSPSNVGQLSFASSRSSSSQKSDPVKLTNPVQDMLIRVFSSNGNGRGVRLTASSSLNEAGESLTARSLLVGPGSYHEWDGIVRENPSPASVLSSCPSSPALDSASLSLSRTVTRERRLESTQLKDAAVSEHSSSPSVLDGSIDDNLCDQLERALVEAESAKRAALEEAINRGKAEKDFIDAVRRTKALESLYSEEVKQKRDIEQELAKQEEALEKMKCERDEVMNELHIALERKSSLEIQIAESDQVVQELEQKIISAVELLQSFKKERDDLQIERDSALKEAEELRTRQRESSSISTPRFYSEISFSEIEEATKNFDASLKIGEGGYGSIYKGLLRHTQVAIKIPHPHSLQGPSEFQQEVDVLSKVRHPNLVTLIGSCPEAWALIYEFLPNGSLEDRLSCRDNSPPLSWQTRVRIAAEMCSALIFLHSSKPHSIVHGDIKPANVLLDAHFVSKLGDFGICRFLHRDQSSSNNTTLLCRTEPKGTFAYMDPEFFSTGELSTKSDAYSFGIILLRLLTGRHALGIVKEVQYALDKGNLKALLDPLAGDWPFVQAEQLVHLALRCCDMNRKNRPNLESEVWRVLEPMRAFCRGSPSAPFGGGEQSQPPPYFICPILLEVMQDPHVAADGYTYEAEALRGWLESGHDSSPMTNYPLAHTNLVPNRALRSSIQEWVHNRST
Length911
PositionTail
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.06
Grand average of hydropathy-0.350
Instability index49.72
Isoelectric point5.79
Molecular weight101267.89
Publications
PubMed=28654223

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14204
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     253.99|      78|     101|     715|     796|       1
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  715-  796 (118.35/122.71)	EPKGTFAYMDPEF.FSTGELStKSDAYSFGIILLRLLTGRH..ALGIVKEVQyALdKGNLKALLD..PLAgDWPFVQAEQLVHLALR
  817-  899 (135.64/114.61)	EPMRAFCRGSPSApFGGGEQS.QPPPYFICPILLEVMQDPHvaADGYTYEAE.AL.RGWLESGHDssPMT.NYPLAHTNLVPNRALR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.34|      16|      19|     423|     440|       2
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  423-  440 (21.86/19.10)	ESLysEEVKQKRD.IEQEL
  445-  461 (24.48/13.74)	EAL..EKMKCERDeVMNEL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.62|      14|      44|     313|     326|       3
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  313-  326 (25.40/15.40)	DGIVRENPSPASVL
  359-  372 (24.22/14.32)	DAAVSEHSSSPSVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.04|      34|     103|     378|     411|       4
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  378-  411 (53.78/35.05)	DNLCDQLERALVEA....ESAKRAALEEAINRGKAEKD
  479-  516 (48.26/30.74)	DQVVQELEQKIISAvellQSFKKERDDLQIERDSALKE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14204 with Med32 domain of Kingdom Viridiplantae
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