<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14202

Description Uncharacterized protein
SequenceMAGSWRARGSLIVLSILFFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKRGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHNKDISKDNRALGKLRRECERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRMLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNSLETYIYNMKNQVNDKDKLADKLEADEKDKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGESTEEDEHDEL
Length664
PositionUnknown
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.06
Grand average of hydropathy-0.466
Instability index29.91
Isoelectric point5.11
Molecular weight73519.48
Publications
PubMed=28654223

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14202
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     321.64|      75|     301|     173|     247|       1
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  173-  247 (119.10/75.13)	KDAVVT..VPA....YFN..........................DAQRQATKDAGVIAGLN..VARIINEPTAA...AIA.YGLDKRGGE..KNILVFDLGGGTFDVSVLTIDNG
  310-  373 (67.79/39.49)	HQVRVE..IES....LFD..........................GTDFSEPLTRARFEELNndLFRKTMGPVKK...AMEdAGLEKNQID..EIVLV...GGST...........
  375-  438 (61.97/35.44)	...IPK..VQQllkdYFD..........................G..KEPNK..GVNPDEA..VAY.....GAA...VQG.SILSGEGGEetKDILLLDVAPLTLGIE..TV...
  440-  540 (72.79/42.96)	..GVMTklIPR......NtviptkksqvfttyqdqqttvsiqvfEGERSLTKDCRMLGKFD..LSGIPPAPRGTpqiEVT.FEVDA.NGI..LNVKAEDKGTGKSEKITITNDKG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      96.29|      27|      33|     583|     609|       3
---------------------------------------------------------------------------
  551-  572 (27.05/12.21)	..VREAEEFA...EEDKK..VKERIDARN
  583-  609 (42.34/22.81)	NQVNDKDKLADKLEADEK..DKIETATKE
  617-  642 (26.90/12.10)	NQSAEKEDYEEKLKEVEAvcNPIITA...
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14202 with Med37 domain of Kingdom Viridiplantae
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