<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14196

Description Uncharacterized protein
SequenceMAPQNEGKAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRRFSDPSVQSDMVHWPFKVVPGPGDKPMIVVTYKGEEKQFSPEEISSMVLVKMREIAEAYLGHSVKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVAEFKRKHKKDISGNARALRRLRTACERAKRTLSSTTQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDSKIDKSQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPAKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKDEIERMVKEAEKYKAEDEEVKKKVDAKNALENYAYNMKNTVKDEKFAGKLNPADKQKIEKAIEEAIEWLDRNQLAEVDEFEDKLKELEGLCNPVIAKMYQGGAGDVPMGGTGDMPNGYSKATPNGTGQGPKIEEVD
Length654
PositionUnknown
OrganismPunica granatum (Pomegranate)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica.
Aromaticity0.06
Grand average of hydropathy-0.443
Instability index34.17
Isoelectric point5.41
Molecular weight71955.80
Publications
PubMed=28654223

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14196
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.86|      41|      74|     447|     520|       1
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  449-  516 (45.92/88.45)	YEGERARTKDNNLLGKfeltgippaprgvpqinvcfdIDANGILnvsaEDKTAGVKNkiTITNDK..GRL
  526-  568 (62.94/30.80)	KEAEKYKAEDEEVKKK.....................VDAKNAL....ENYAYNMKN..TVKDEKfaGKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     149.26|      51|     189|     170|     230|       4
---------------------------------------------------------------------------
  170-  230 (64.90/65.74)	GLNVMRIINePTaAAIAYGLDKKAS.RSGEKNVLIFDLggGTFDVSLLTIeeGIfevkATAG
  362-  413 (84.35/50.51)	GKELCKSIN.PD.EAVAYGAAVQAAiLSGEGNEKVQDL..LLLDVTPLSL..GI....ETAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.37|      18|      21|       4|      21|       5
---------------------------------------------------------------------------
    4-   21 (33.81/24.15)	QNEG.KAIGIDLG..TTYSCV
   25-   45 (24.56/15.42)	QNDRvEIIANDQGnrTTPSYV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.25|      21|     353|      66|      86|       6
---------------------------------------------------------------------------
   66-   86 (40.81/29.35)	PRNTVFDAKR.LIGRRFSD..PSV
  421-  444 (29.44/19.13)	PRNTTIPAKKeQIFSTYSDnqPGV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14196 with Med37 domain of Kingdom Viridiplantae
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