Description | Uncharacterized protein |
Sequence | MANNPQFSGFQPVRLPVAGSTDPPRSYAPPFPVQSFTAVPAANVGFPSIPQQPQFHSSVLPPRPQYTVQNALLPPGISVPISQTNNQVASESPYPQLIAPPLTNFVPSSIGLGAPLSSSFTFSPHGLQNQANLAAPRPAVQYPPMSQPHVSSVSSGDQSRLASESSPGSSIKPITDQSSASSAAAAEPNARPTPGREGPIDWIEHTSPDGRRYYYNKKTKQSSWQKPFELMTAIERADASTDWREYKSADGRMYYYNKVTKQSKWEMPMELKLARECITKSDVIETPSEMGVANEAPKSLEVSSLKSERTASIPATLEASTSDAEPAIVSTSSPLPTVNSAATFTAPVNEVSPDHSKQAAVAAAETAEAATETVDVFPMPMANPDDLAAQKDLGSSEIVSAPEKASEMASALEKAKDDEIIDEKAERTLEDKLVNHEPLPYANKLEARNAFKALLESANVGSDWTWERAMRVIITDKRYGALKSLGERKDTFNEFVSQRKKQEAEERRLKQKKAREDFKKMLEESKELTSSSKWSKIVRLFEDDERFKAVERERDRQELFDDYIDELEKQERAKAVEERKRSIMEYRQFLESCSFITSSSQWRKVQNRLEADERCSRLEKIDRLEIFQEELRKVERKNRDEFRKLMDEHIASGMLTAKTHWHDYHMKVKDLPAYIAVSSNTSGSTPEDLFEDVVEELAKQYEENKAQIEDALKLRKVEVSPTWTLEDLKAAIADDLRGTPISEINFKLALDELLDKIRRKEEKKRKRMGDKFFDLLHSVREITVSSTWEDCKHHVERSHEYSSIKDENLCQEIFEEYITALKEKEKEYERRHKEDKERERERYGRDGRSWKDRRGKDRHDREEEESRDDGVDDDNTGAISDKRKKSSSKDKDREKKHHKRRHSAPDNLDETDRDHSKRSHKHSSDHKKSKRGSSPESEGEARHKKQKRDHRKGSHRSSNREELEDGEFGS |
Length | 970 |
Position | Unknown |
Organism | Punica granatum (Pomegranate) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Myrtales> Lythraceae> Punica. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.022 |
Instability index | 57.37 |
Isoelectric point | 6.10 |
Molecular weight | 110407.44 |
Publications | PubMed=28654223 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process | mRNA cis splicing, via spliceosome GO:0045292 IEA:InterPro |
Binary Interactions |
Repeats | >MDP14194 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 8| 489.53| 59| 61| 780| 838| 1 --------------------------------------------------------------------------- 465- 515 (56.79/27.23) .......TW..ER..AMRVIITDKRY...GAL.KSLGERKDTFN.EFVSQR..KKQEAE.ERRLK..QKKAR 526- 586 (68.85/34.58) KELTSSSKW..SK..IVRLFEDDERF...KAV.ERERDRQELFD.DYIDELekQERAKAVEERKR..SIMEY 594- 648 (54.66/25.93) SFITSSSQW..RK..VQNRLEADERC...SRLeKIDRL..EIFQ.EELRKV..ERKNRDEFRKLM..DE... 655- 713 (52.06/24.35) ..LTAKTHW..HD..YHMKVKDLPAYiavSSN.TSGSTPEDLFE.DVVEEL.....AKQYEENKAqiEDALK 715- 765 (49.19/22.60) RKVEVSPTWtlED..LKA............AI.ADDLRGTPISEiNFKLAL..DELLDKI..RRK..EEKKR 780- 838 (99.13/53.04) REITVSSTW..ED..CKHHVERSHEY...SSI.KDENLCQEIFE.EYITAL..KEKEKEYERRHK..EDKER 845- 895 (56.62/27.13) RD...GRSW..KDrrGKDRHDREEEE...S...RDDG....VDD.DNTGAI..SDKRKKSSSKDK...DREK 901- 947 (52.23/24.45) RHSAPDNLD..ET..DRDHSKRSHKH...SS...DHKKSKR.........G..SSPESEGEARHK..KQK.. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 157.67| 39| 40| 197| 235| 2 --------------------------------------------------------------------------- 197- 235 (80.45/46.92) EGPIDWIEHTSPDGRRYYYNKKTKQSSWQKPFELMTAIE 238- 276 (77.22/44.76) DASTDWREYKSADGRMYYYNKVTKQSKWEMPMELKLARE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 67.12| 23| 24| 144| 167| 3 --------------------------------------------------------------------------- 75- 98 (32.28/20.47) PGISVPISQTNNQVASESPyP.....QLI 148- 175 (34.84/18.00) PHVSSVSSGDQSRLASESS.PgssikPIT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 159.45| 46| 47| 296| 342| 4 --------------------------------------------------------------------------- 283- 326 (67.53/34.44) .VIETPSEMGVANEA.....PKSLEVSSLKSERT........ASIP..A.TLEASTS..DAEP 327- 378 (56.67/28.93) AIVSTSSPLPTVNSAatftAPVN.EVSPDHSKQA........AVAA..AeTAEAATEtvDVFP 397- 447 (35.25/14.56) EIVSAPEKASEMASA..leKAKDDEIIDEKAERTledklvnhEPLPyaN.KLEA......... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 42.13| 12| 47| 3| 14| 5 --------------------------------------------------------------------------- 3- 14 (24.26/13.04) NNPQF.SGFQPVR 51- 63 (17.87/ 7.67) QQPQFhSSVLPPR --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EARHKKQKRDHRK 2) GRRYYY | 940 210 | 952 215 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab