<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14133

Description Uncharacterized protein
SequenceMDNSCLLDLLIRCFAMTEPEDLNFTAFTDLCRLCSLKSGPRLHIFDKESEQRQILFKMRTCLPTMQISKDDFLPKKICERCVTRLEQLYEWRQSCLNTDSVLRNYAESMRIVTSTINFQHRRDKALRIRPSIGNLRGGLPKQADANSDHSSVPISVVSLIVKDGTVNMDKMTEAQKTAYLEAHVAVQQHMAQAAAAARREQQQQQQQHQQQQQQQQQQQQQHQQQQQHQQHQQQQQQQQQQQQQQQQQSNNSNNNSRHHQDMQQAQSNTHPGHPSPPTVSSTQHHYATINSPIKVPQVSSSTGGPDSTFTVPDDVGMGFEGGVRVLQSLGNWSPEVTNTIPRPNLIPFTEPYAEGGSMHPGTRLKALQGTAIRKHPAIKPTSSTNEGSKAFECTVCGKGLARKDKLTIHMRIHTGEKPYVCEVCNKAFARRDKLVLHMNKLKHITPSNIAPLGKRTITIPPLKLDDVKPQLTKQEDTKPSQAEIAAVAQQQQQQQQQQQQHSHQQSIQVCQVPGHNFTNTNLVHTSASSGSVSAATAGMVVSWSCELCGRLFATRDEWSAHAKSHLPDNKLLQDKMQQATQHQQQEKLHLTNQEKLQLLHHHNQNQQILNNHGIATSVSSATVVNEGGGGGGGGAYFSHGHTHYAPERQHTHAHHLCLMCRQEFAGKAEFMFHVRGHFEGKVSDIAAADVLARSLVDNSGLCT
Length703
PositionKinase
OrganismDanaus plexippus plexippus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Lepidoptera> Glossata> Ditrysia> Papilionoidea> Nymphalidae> Danainae> Danaini> Danaina> Danaus> Danaus.
Aromaticity0.04
Grand average of hydropathy-0.762
Instability index56.40
Isoelectric point8.83
Molecular weight78668.36
Publications
PubMed=22118469

Function

Annotated function 
GO - Cellular Component
nucleus	GO:0005634	IEA:InterPro

GO - Biological Function
zinc ion binding	GO:0008270	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14133
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     132.85|      17|      17|     201|     217|       1
---------------------------------------------------------------------------
  201-  217 (39.19/12.99)	QQQQQQQHQQQQQQQQQ
  219-  235 (36.70/11.75)	QQQHQQQQQHQQHQQQQ
  236-  250 (31.50/ 9.14)	QQQQQQQ..QQQQQQSN
  494-  508 (25.47/ 6.12)	QQQQQQQHSHQQSIQ..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     135.58|      24|      25|     387|     410|       3
---------------------------------------------------------------------------
  365-  386 (26.12/14.34)	..KALQGTAIRKHPAIKPTSSTNE
  387-  410 (44.09/29.17)	GSKAFECTVCGKGLARKDKLTIHM
  415-  438 (44.31/29.36)	GEKPYVCEVCNKAFARRDKLVLHM
  545-  561 (21.06/10.16)	......CELCGRLFATRDEWSAH.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.00|      27|      31|     293|     322|       7
---------------------------------------------------------------------------
  293-  322 (47.27/33.43)	IKVPQvssSTG..GPDSTFTVPDDVGMGF.....EGG
  323-  356 (39.73/21.26)	VRVLQ...SLGnwSPEVTNTIPRPNLIPFtepyaEGG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14133 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KLDDVKPQLTKQEDTKPSQAEIAAVAQQQQQQQQQQQQHSHQQSIQVCQ
2) TVNMDKMTEAQKTAYLEAHVAVQQHMAQAAAAARREQQQQQQQHQQQQQQQQQQQQQHQQQQQHQQHQQQQQQQQQQQQQQQQQSNNSNNNSRHHQDMQQAQSNTHPGHPSPPTVSSTQHHYATINSPIKVPQVSSSTGGPDSTFTVPDDVGMGFEGGVRVLQSLGNWSPEVTNTIPRPNLIPFTEPYAEGGSMHPGTRLKALQGTAIRKHPAIKPTSST
3) WSAHAKSHLPDNKLLQDKMQQATQHQQQEKLHLTNQEKLQ
463
165
558
511
384
597










Molecular Recognition Features






MoRF SequenceStartStop




NANANA