<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14128

Description Mediator of RNA polymerase 2 transcription subunit 24
SequenceMSLLDPLVKLNVVAESQLAYFNQKRETKDSMLQKLEPTGLQGSVPAYFITRAEPTLAGILKTMGGDFHKTQDSLHAMLCQIVGGTTLDTILAVATVEGKLKLFVSRLIKFNEFALISASEKNAPQSKVYIFDISFLILCSIVQDYGAEAVLDENGDSFFEQWVRECMPQKGVHKSPEQILQKCDSQVIDIFIHHLSAPDFDFKNTNLKPHDLCINVCGVIKEILFAWEQGSISSADLKRMLDSLRQKMASLAVCASSWLCAYVNVVHQDAILKPINIIQQFLSAPSEVELTQIDNFKERAILMCQIIRKLQYDIHPPSVLKAKTLNLSHYIVSKQPILEQLQSVWDDIKTRGYLHIDATHIIDSLLNTAGPVWLVTNLLKQTLKFRYQDDLDRSVDIVVAIFHLDIEKCSQALLLYVLPQYLYNAKLCNELVEPQSAILAKLCVYCIYAALEHSISRKVTTSRKRRHDDSEDLDAICSSNKVRRLNDNTSDALYYSQGQSMGIIIKEPLQSALEMLFKSFSQLAGKNGDVTPQTQFIFEFISYAVQCGQDRAQVVLQKMPSEIVPTLIKALPDNFNTGLILRLYDLSTPYGRKDTARDLCLLRNMRLRPE
Length610
PositionTail
OrganismDanaus plexippus plexippus
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Lepidoptera> Glossata> Ditrysia> Papilionoidea> Nymphalidae> Danainae> Danaini> Danaina> Danaus> Danaus.
Aromaticity0.08
Grand average of hydropathy-0.027
Instability index47.64
Isoelectric point6.41
Molecular weight68888.04
Publications
PubMed=22118469

Function

Annotated function
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro
GO - Biological Function
GO - Biological Process

Interaction

Binary Interactions

Repeat regions

Repeats

>MDP14128
No repeats found




Explaination for Stockholm format The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space.

#=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00)

#=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column. It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column. This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.

#=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.

Alignment of MDP14128 with Med24 domain of Kingdom Metazoa

Intrinsically Disordered Regions

IDR SequenceStartStop
NANANA

Molecular Recognition Features

MoRF SequenceStartStop
NANANA