<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14119
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MEVLYSIDVEGEIKQNDWLTEGKCCCCLSCQNLMCICKQSTSGSDKEDAAGKFNVIYEVIVFDLDKPWEFFTVMTSPVSVTCMTWDRTGTRLLITDMDGQCQVWQMEDFFINKWKLLGKSSIPGEEILAMAWFHTGVQINFNPEKRDAVTYTEKFLRSKFTPTLTQFGGQPLDGWLAVTETGLISVGVINQQDQTIMTAQASLGGSHLRLSLATIAHTGTGEVMVATADGQLSSTIQCFLVTVRVTQSAVKVLAKASSSLYMKSQMDYGAQDSQKMMVSHIQFLNAESSDTLILCCGSQGYSCLEVWQLIDQHIPLNKLFQMSSGPDTAYKIPKWMHKATIPHASYLSAIAGPTLPMSKTFMETGFSPYIAVAYRDSTIKLIHRYTHQVIHTYFDALGAANQSISPTKRQKLTIHASNMIQTLSGCGLIALHDGKVSVLRVYNMRDGLMAMNPSYVCLLLEYAMVTGQDWWDAMLAVKQNTIDGISQKLTENYFKQTYSMQDVVSIRLVALKVALYSSANNGHQRAMDYHARLVLQSITALFRGLLRPKSANQQEKTPAEKLGALCKTTDGNLENILLNLEIEDFLIDSRKRDKSQGAEESALQSLQPLIQWVADFTLHLLATIPMYQSYSSFPGSSLLTDRSLLNTLRELLVIVRVWGIISPSCLPVFTTSSTDCLAHLFKVVTKAWQCCKEGGGVECDDALLDECCLLPSKIVIPSMNQSFRLDDSGYSIFTQPSSQMFSLGEEPEFMYNRKKLKFPFLSDVLTESQQNHDIIRQVHLGARPSDAVRRCTRCGGYSLIKSLGKSPIMKSWEARWRKNCLCGGLWKVEK |
Length | 830 |
Position | Tail |
Organism | Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Spiralia> Lophotrochozoa> Mollusca> Bivalvia>
Autobranchia> Pteriomorphia> Pectinida> Pectinoidea> Pectinidae>
Mizuhopecten.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.075 |
Instability index | 43.47 |
Isoelectric point | 6.98 |
Molecular weight | 92715.98 |
Publications | PubMed=28812685
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP14119
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 47.30| 13| 24| 314| 326| 1
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314- 326 (23.96/17.82) IPLNKLFQMSSGP
341- 353 (23.34/17.14) IPHASYLSAIAGP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 156.63| 47| 361| 385| 445| 2
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385- 431 (80.63/78.67) YTHQVIHTYFDALGAANQSISPTKRQKLT...IHASNMIQTLSGCGLIAL
462- 511 (75.99/45.76) YAMVTGQDWWDAMLAVKQNTIDGISQKLTenyFKQTYSMQDVVSIRLVAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 110.21| 33| 201| 74| 108| 4
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74- 108 (58.18/41.89) MTSPVSVtcMTWDRTGTRLLITDMDG.QC.QVWQMED
277- 311 (52.03/30.45) MVSHIQF..LNAESSDTLILCCGSQGySClEVWQLID
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