<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14111

Description Uncharacterized protein
SequenceMAVIGQTSGIWDSVLELIKVAQNKGCDPLHWAIQLTSNLSSAGVSLPSTELAHLLVSHICWANNVPIAWKFLERALTGKMVHPMLVLALLSCRVIPNRRSRPAAYRLYMELTKRHAFSFASQINGSDNQKSMKAIDDVLHLSQQFGLEASEPGILVVEFVFSIVWQLLDATLDDEGLLELTPEKKSRWATRLQDMEIDGDDSFNEKLTEHHERLQKANTVMAVELIGQFLQRKLTSRLLYLARENMQTQWGGFIQRIRLLGAHSSALRSSKTISPETLLQLSSETRKVLSRERKTSLQKELHAVMASGSLTSSAGQCHGASCSAIWLPLDLFLEDTNDGSQVAATSAIEVLTGLIKSLQAVNGTSWHDTFLGLWFAAIRHVQRERDPIEGPVPRLDTRLCLLLSITTLAIADIIEEEEVVVIDEKERNSTNQWNDKQAGGKRRDDLISSLKTLGDYESLLTPPQSVISAANQAAAKAMMFVSGLAVGSGYFDCISMNDMPMNCSGNMRHLIVEACIARNLLDTSAYFWPGYVNGRISQLPHIAPGQVLGWSSLMKGAPLTSTMVTALVSVPASSLPELEKIFEIATNGSDDEKISAATILCGASLVRGWNIQEYTVRFVTELLSPPVPADYSGSDSHLIGCAPLLNTVLVGIAAIDLIQVLSLHGLVPQLAGALMAICEVFGSCVPNVSWTLPTGEEFNAHTVFSNAFTLLLRLWRFNHPPFEHVMGDVPPVWSQLTPEYLLLVRNSQLVASGDTPTDQNRSRRNSRVTSSPSVQPIFVDSFPKLKVWYRQHQACIASTLSGLVHGTPVHQIVDSLLNMMFRKMNKGGSQPLTSGSSSSSGPGSEDVSLRPKIPAWEILEAVPFVVDAALTACSHGRLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGVWNPAFMNGTDWPSPAANLSTAEEQIKRILAATGVDVPSLVAGGSSPATLPLPLAAFVSLTITYKLDRDSERFLNLAGPALESLAAGCPWPCMPIVASLWAQKVKRWSDFLIFSASRTVFHHNSDAVVQLLKSCFTATLGLSGSPITSNGGVGALLGHGFGSHFYGGFSPVAPGILYLRVYRCIRDIMFMTEVILSLLMFSVREIAASELQRERMEKLKKTKYGMRYGQVSLAEAMKRVKLAASLGASLVWLSGGSALVQCLIQATLPSWFLSVHGPEQEGGCGGMGAMLGGYALAYFAVMCGTFAWGVESVSTASKRRPKVIGAHFEFLAGVLDGKISLGCDWATWHAYVSGFLSLMVGCTPEWLLEVDVDVLKRLSKGLRQWNEEELALALLGRGGSGTMGAAAELIILNSSE
Length1327
PositionTail
OrganismMacleaya cordata
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Papaveraceae> Papaveroideae> Macleaya.
Aromaticity0.07
Grand average of hydropathy0.122
Instability index41.73
Isoelectric point6.30
Molecular weight144186.46
Publications
PubMed=28552780

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14111
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.83|      20|     125|     500|     523|       1
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  500-  523 (30.55/34.15)	PMNCSGNMRHLIveACIArnLLDT
  628-  647 (39.29/27.14)	PADYSGSDSHLI..GCAP..LLNT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     122.33|      40|     274|     250|     324|       2
---------------------------------------------------------------------------
  275-  314 (63.99/81.73)	PETLLQLSSETRKVLSRERKTSLQKELH.AVMA...SGSLTSSA
 1275- 1318 (58.34/16.94)	PEWLLEVDVDVLKRLSKGLRQWNEEELAlALLGrggSGTMGAAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     245.38|      66|     125|     884|     959|       3
---------------------------------------------------------------------------
  891-  959 (108.30/88.28)	ADFLP.ASLATI.VSY.FSAEVTR..GVWNPAFMN...GTDWPSPAANLSTAEEQIKRILaatGVDVPSLVAGGSSP
  964- 1018 (39.95/17.94)	...LPlAAFVSLtITYkLDRDSERflNLAGPALESlaaGCPWPCMPIVASLWAQKVKR...................
 1020- 1082 (97.13/58.50)	SDFLI.FSASRT.VFH.HNSDAVV..QLLKSCFTA.tlGLS.GSPI....TSNGGVGALL...GHGFGSHFYGGFSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.31|      17|     274|     555|     573|       4
---------------------------------------------------------------------------
  555-  573 (26.08/19.87)	KGA..PLTSTMVTAlvSVPAS
  826-  844 (28.23/15.23)	KGGsqPLTSGSSSS..SGPGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     247.90|      72|     155|       8|      82|       6
---------------------------------------------------------------------------
    8-   82 (121.41/91.24)	SGIW...DSVLE...LIKVAQNKGCdplHWAIQLTSNLSSAGVSLPSTELA..HLLVSHIC..WANNVP.IAWKFLERALTGKMVH
  162-  240 (98.74/65.72)	SIVWqllDATLDdegLLELTPEKKS...RWATRL.QDMEIDGDDSFNEKLTehHERLQKAN..TVMAVE.LIGQFLQRKLTSRLLY
  654-  690 (27.76/11.59)	..............................AIDLIQVLSLHGL.VP..QLA..GALMA.ICevFGSCVPnVSW.............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.94|      22|      38|    1157|    1191|      11
---------------------------------------------------------------------------
 1157- 1182 (34.26/49.25)	LGASLvwlsGGSALVQCLIQATLPSW
 1198- 1219 (43.68/22.63)	MGAML....GGYALAYFAVMCGTFAW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14111 with Med33 domain of Kingdom Viridiplantae
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