<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14080
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MAELGQQTVEFSTLVRRAAEDSFLSLNDLVEKSKTSEQSDSEKKISLLKYIVKTRQRMLRLHVLAKWCQQVPLVQYCQQLASTLSSHDTCFTQTADSLFFMHEGLQQARAPTYDVPSAIEVLLSGSYEKLPKCIEDMGVQSALAGDQQKSALKKLDTLLRSKLLEISLPKEISEVKVSDGTVVVLVEGEFKVLLTLGYRGHLSLWRILHLELLVGERSGLVKLEESRRHALGDDLERRMAAAENPFVILYSILHELCVALIMDTVIRQVQGLRQGRWKDAIRFELISDGNTGQGGNAGSLQMGQDGEADLAGLKTPGLKILYWLEFDKSTGGSDPGCPFIKIEPGQDLQIKCLHSTFVIDPQTGKEGEFSLDLSCIDVEKLLLRAISCNRYTRLLEVHRELGKNCQISQAANDVLLQCHGDKSDMDMKKKDIKSSSREYGGNEVLRVRAYGSSYITLGINIRNGRFFLQSSRNILAPSVLLECEDALNQGGMTAAEVFINLRSKSILHLFASIGRFLGLQVYEQGFTAVKIPKNILNGSGLLLMGFPQCGSSYYLLLELDKDFKPLFSLLETQPDTSGKSHFVSESNHVIRFNKIDISQMQMLEDELNLSLLDWEKLMSSLPNVGGTNQTSEHGLLTEFGLDASTQIAGSPQSSFSSVVDEVFELEKGISMPPFPVQNHLSSSFGTSPVSQFGSVQMNHQWVKAGITSPKWEGGLQHPQVNSFTKVPSGGSHFNNLYQSNNLKLIQSSSVNSLSSSPGRSQSIQKLSASKSDQDLASLRSPISVEVGSPMDEDQVRLLNESSKELVPSSRSSRLLSPLRPTVPRVSASSTKPNGPRVSPSVHITGSRADGTGSWITSPVCQAPESGVSNNSSRDLVPKHNKNPRKRSISDVLRLIPSLQGEEVSTVCKRRKISDSAHCYPPGSQAVCSSDVIGKSEVYTYGNLLAEANKGNAPSNIYVTALLHVVRHCSLCIKHARLTSQMAALEIPYVEEVGFRTPSSNIWFRLPFAREYSWQNICLRLGRPGSMYWDVKINDQHFRDLWELQKGSTNTPWGCGVRIATTSDVDSHIRYDPEGVVLSYRSVEADSIKKLVADLRRLSNARLFALGMRKLLGVRTDDKLDESSANTESKIPVGSKGAVEVVDKMSEQMRKAFRIEAVGLMSLWFSFGPGVVARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFINGGEVASLLDCIRLTAGPLLALAAATRPARAGPASAAPNIPASASSIPKQNAFVQSQGVLPSSSSSNVTQTTTSPSGNPIANNGVGPLGSHGLHNAAMLAVAGRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKNFSVDMRCFAGDQVWLQPATPPKEGRTVGGSLPCPQFRPFIMEHVAQELNGLEPTFAGGQNTVGLVNSNNPNPSSASNLPNANRVNLASAGGISRPTSVAGLSRMGNALMASSNLAAVSSGLPIRRTPGTGVPIHVRGELNTAFIGLGDDGGYGGGWVPLVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGTLLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQSQASAQEELTHAEISEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLSQAQGGEMAPAQKPRIELCLENHAGLSMDENSENSSSTSKSNIHYDRPHNSVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGENPRVSFLGMEGSHGGRACWFRLEDWEKSKQRVTRTVEMNGTTGGDVTQGRLRLVADSVQRTLQLCLQGLRDGSAVTASTGTT |
Length | 1823 |
Position | Tail |
Organism | Macleaya cordata |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Ranunculales> Papaveraceae> Papaveroideae>
Macleaya.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.196 |
Instability index | 47.85 |
Isoelectric point | 8.30 |
Molecular weight | 199008.41 |
Publications | PubMed=28552780
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP14080
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 160.49| 49| 146| 1258| 1324| 1
---------------------------------------------------------------------------
802- 852 (79.33/33.45) SKELVPSSRSSRLLSplRPTVPRVSASSTKPNGPRVSPSVHITGSRA.DGTG
1261- 1310 (81.16/57.62) SQGVLPSSSSSNVTQ..TTTSPSGNPIANNGVGPLGSHGLHNAAMLAvAGRG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 50.25| 15| 18| 674| 688| 2
---------------------------------------------------------------------------
674- 688 (30.03/11.78) F..PVQNHLSSSFGTSP
711- 727 (20.22/ 6.05) WegGLQHPQVNSFTKVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 64.25| 19| 148| 577| 599| 3
---------------------------------------------------------------------------
577- 599 (29.44/30.69) SGKSHFvsesNHVIRFNKIDISQ
728- 746 (34.80/24.41) SGGSHF....NNLYQSNNLKLIQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 181.89| 55| 233| 1440| 1499| 4
---------------------------------------------------------------------------
1440- 1499 (86.18/66.57) AGLSRMGNALMASSnlaAVSSGLPIRRtPGTGVPIHVRGELNTAFIGLGDDGGyGGGWVP
1674- 1728 (95.71/57.47) AGLSMDENSENSSS...TSKSNIHYDR.PHNSVDFALTVVLDPAHIPHINAAG.GAAWLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 130.36| 40| 233| 368| 407| 5
---------------------------------------------------------------------------
368- 407 (69.63/47.58) EFSLDLSCIDVEKLL..LRAISCNRYTRLLEVHRELGKN..CQI
604- 647 (60.73/40.45) EDELNLSLLDWEKLMssLPNVGGTNQTSEHGLLTEFGLDasTQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 66.85| 20| 69| 231| 250| 6
---------------------------------------------------------------------------
231- 250 (35.65/24.86) LGDDLERRMAAAENP.FVILY
302- 322 (31.20/20.72) MGQDGEADLAGLKTPgLKILY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 150.45| 48| 571| 1162| 1242| 7
---------------------------------------------------------------------------
1167- 1237 (64.25/100.16) GPGVVarfvvewesgkegctmhvsPDQLWP.......HTKFLEDFINGGEVASLLDCIrltAGPLLALAAATrPARAG
1311- 1365 (86.19/44.97) GPGIV...................PSSLLPidvsvvlRGPYWIRIIYRKNFSVDMRCF...AGDQVWLQPAT.PPKEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.11| 16| 17| 906| 922| 8
---------------------------------------------------------------------------
906- 922 (28.49/21.07) VCKRRKISDSaHCYPPG
926- 941 (26.62/14.86) VCSSDVIGKS.EVYTYG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 58.74| 15| 71| 445| 468| 9
---------------------------------------------------------------------------
445- 459 (26.22/ 6.27) LRVRAY..GSSYITLGI
544- 553 ( 2.36/ 6.65) ..MGFPqcGSSY.....
1018- 1032 (30.15/ 9.24) LRLGRP..GSMYWDVKI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.85| 16| 17| 976| 991| 16
---------------------------------------------------------------------------
976- 991 (26.21/16.22) RLTSQMAALEIPYVEE
995- 1010 (29.65/19.37) RTPSSNIWFRLPFARE
---------------------------------------------------------------------------
|