<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14064

Description Uncharacterized protein
SequenceMEGGAAAAMAALPGQDQTQIQGQQQQQQQQKVVVVEKLNQAVQQQLNLESVKTRAIGLYKAISRILEDFDAIARTNSVPKWQDILGQFSMVNLELFSIVEDIKKVSKAFVVHPKNVNAENATILPVMLSSKLLPEIEAEDNSKREQLLHGMQNFPISTQIEKLKARIDMIGAACESAEKVIADTRKAYGLGTRQGPTILPTIDKVQAAKIQGQENLLRAAVNSGERLRMQGDQRQLPASLPMHLVDVLSVGDGAQSFPDASGMYAKNTPTSLPSNNTNSQGAVPQSTGAQLIGRSIPSPSGAVGVTSFDNTTTSPLPYANSPRSGTNIMNTPSPQQQTQQLQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQLQQRQKMMQLPHQQQQLLSQQTFRSLAQGGMGQVQFMQYAQQLASRQLQSGHVQHANQLNQGNIRSHLSQLAGTANSALFSAAQTSPNSQMLCESKHSGNGKEGRDPRIVDWYDENELLRVETSLLDTCILPHRGAEIQ
Length521
PositionHead
OrganismMacleaya cordata
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Ranunculales> Papaveraceae> Papaveroideae> Macleaya.
Aromaticity0.03
Grand average of hydropathy-0.691
Instability index60.81
Isoelectric point8.33
Molecular weight57569.86
Publications
PubMed=28552780

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14064
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.83|      15|      15|     345|     359|       1
---------------------------------------------------------------------------
  345-  359 (34.42/ 9.64)	QQQQQQQQQQQQQQQ
  361-  375 (34.42/ 9.64)	QQQQQQQQQQQQQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.75|      15|      15|     378|     392|       2
---------------------------------------------------------------------------
  378-  392 (31.32/11.50)	HQQQQLQQRQKMMQL
  394-  408 (25.43/ 7.85)	HQQQQLLSQQTFRSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     186.71|      40|      40|     232|     271|       3
---------------------------------------------------------------------------
  124-  162 (49.87/28.16)	LPVMLSSKLLPEIEAEDNSKREQLLHGM......QNFPIS................................tQIEK
  163-  235 (37.95/19.77)	LKARIDMIGAACESAEKVIADTRKAYGLGT....RQGPTIlptidkvqaakiqgqenllraavnsgerlrmqgDQRQ
  236-  280 (60.75/35.82)	LPASLPMHLVDVLSVGDGAQSFPDASGMYA....KNTPTS............................lpsnnTNSQ
  283-  315 (38.13/19.89)	VPQSTGAQLI.....G...RSIPSPSGAVGvtsfDNTTTS....................................P
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14064 with Med8 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ANSALFSAAQTSPNSQMLCESKHSGNGKEGRDPRI
2) QSFPDASGMYAKNTPTSLPSNNTNSQGAVPQSTGAQLIGRSIPSPSGAVGVTSFDNTTTSPLPYANSPRSGTNIMNTPSPQQQTQQLQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQLQQRQKMMQLPHQQQQLLSQQTFR
457
255
491
406










Molecular Recognition Features






MoRF SequenceStartStop




NANANA