<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14034

Description Uncharacterized protein
SequenceMSRLCTVKVVREEDFRSQIGHDGHYFDLVDFSRVPGFQVVVDTPICHFKEQLAEEFGIPIQSQRLWLFVQRINGTFRPCTPLAPNEEKLSVLHPLPVRNMISKDDILVFLKLYDPGQRQLRYVSTLFVKASSRPSRILPKLRTLAGFHAYEEIELYEEVNFEPTLMCVRIDINATFTYSQIQNGDIICYQKMPKAEDKYPNVELFFKHVHGQKDPQIRIQALEEEVAMLKHQVHCEKEAKKGRSISQEHILVDMHLEEKLAATTYNIHLCNAECDELKQELDNAMRQVDELRDQNRHIILEFSIQDLEQATENFSDMCNVGDNEYGGVYKGNVHKTMVAIKLSCSQSLFQQEVSILQKCRHPNIVTIIGICSEASALVYEWLPNGNLEDCIVSSNNSPPPLPWCKRTQIIGDVCCTLLFLHANKPSALVHGDLRPCNILIDANYRSKLCNFGLSNLFLAPGAFPPNLNVRLPYIDPEFLTTGELTPQSDIYSLGVIILRVLTGMSPFSIAKKVASALESDTLHLMIDKSAGNWPYTQAKQLAFLGLSCMEMTREKRPDLLTDVWKVIEPMVTRPLVAYFQSVFEGSSAPAHFFCPIRMEIMKDPQVASDGFTYESEAIKHWLDRGNTRSPMTNLALPNRDIIPNHALRSCIQEYLEFQRQQGQNLDP
Length667
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.08
Grand average of hydropathy-0.228
Instability index50.93
Isoelectric point5.81
Molecular weight76061.62
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:EnsemblPlants

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14034
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     115.34|      33|      46|     356|     390|       1
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  356-  390 (57.00/40.44)	LQKCRHPNIVTiiGICSEASALVYEW...LPNGNLEDC
  401-  436 (58.34/35.55)	LPWCKRTQIIG..DVCCTLLFLHANKpsaLVHGDLRPC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.44|      28|      46|     249|     276|       2
---------------------------------------------------------------------------
  249-  276 (49.05/35.64)	HILVDMHLEEKLAATTYNIHLCNAECDE
  297-  324 (48.39/35.06)	HIILEFSIQDLEQATENFSDMCNVGDNE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.98|      17|      21|     457|     474|       3
---------------------------------------------------------------------------
  450-  466 (32.22/19.33)	NFGLSNL...FLAPGAFPPN
  468-  487 (25.77/ 9.90)	NVRLPYIdpeFLTTGELTPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.08|      21|      21|     190|     210|       4
---------------------------------------------------------------------------
  190-  210 (39.15/26.74)	QKMPKAEDKYPNVEL.FFKH.VH
  212-  234 (27.93/17.13)	QKDPQIRIQALEEEVaMLKHqVH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14034 with Med32 domain of Kingdom Viridiplantae
Unable to open file!