<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14033

Description Uncharacterized protein
SequenceMSRRQGASSSSYSVSSFMSDELDYSDSLSLHEDSSTEHSGSRSELLSSLSVDLKMPPTEHVQSPAPHRDLEDMDFDADLQDRLQKAFDEIVKLKKENLEESCQRQQVEKELLVVRKKAKKLQDHLLKELQHSKGFEEARAADQRLIQKLKKDIELLKIQRDEYLEKFHQASDQILLQPLGAAKEAHEQDKHEIETLREGISQLKIHRDEYLAKFQEKNKPKLAPVQDIAVRYSEGHTQFTLDQLKLATENFSELLKIGEGGYGRVYKGTICDTAVAIKILRHNENLQGLLQFQREVLILTKVRHPHLVNLLGACDEVSALVYDYLPNGSLEDRLSCKGNTPALTWQVRTRIIGEICSALIFLHSHKPKPIVHGDLKPSNILLDADLVSKLGDFGIARFLVPSDTSTMVHLTDHPIGTMFYSDPEYMAHGRHPREIVKRVEDAMINDELHTIIDRSAGEWPFVQWLRQ
Length467
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.531
Instability index45.80
Isoelectric point5.95
Molecular weight53285.92
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14033
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     193.79|      43|      44|     136|     178|       1
---------------------------------------------------------------------------
  103-  131 (28.56/11.29)	..........QR..QQVEK....ELLVVRK.....KAKKLQDHLLkeLQH
  136-  178 (74.25/38.95)	EEARAA...DQRLIQKLKKD..IELLKIQRDEYLEKFHQASDQIL..LQP
  183-  224 (69.28/35.94)	KEAHEQ...DKHEIETLREG..ISQLKIHRDEYLAKF.QEKNKPK..LAP
  233-  262 (21.70/ 7.13)	SEGHTQftlDQ.L..KLATEnfSELLKIGEGGY.................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.15|      19|      20|      22|      41|       2
---------------------------------------------------------------------------
   22-   41 (29.29/18.82)	LDYSDSLSLHEdSSTEHSGS
   45-   63 (31.86/16.15)	LLSSLSVDLKM.PPTEHVQS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.22|      35|      42|     280|     321|       3
---------------------------------------------------------------------------
  271-  313 (43.02/39.49)	CD..TAVAikiLrHNENLQGLLQFQREVLILT.KVRhphlVNLLG.A
  314-  355 (43.20/30.24)	CDevSALVydyL.PNGSLEDRLSCKGNTPALTwQVR....TRIIGeI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.55|      20|     304|      64|      83|       4
---------------------------------------------------------------------------
   64-   83 (38.83/28.30)	PAP..HRDLE..DMDFDADLQDRL
  367-  390 (26.72/17.03)	PKPivHGDLKpsNILLDADLVSKL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14033 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) SDSLSLHEDSSTEHSGSRSELLSSLSVDLKMPPTEHVQSPAPHRDLEDMDF
25
75










Molecular Recognition Features






MoRF SequenceStartStop




1) SYSVSSFMSDELDYSDSLSLHEDSS
11
35