<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14025

Description Uncharacterized protein
SequenceMSLITTKVHFWVLSIPDVPGTVIQATQSSCNVFVVSKRRLIMKLARYPQKSESNTNLRIESISHETFALSHRSLLFDNFASDEAQSDSFSQSHSSYSASNVVPSSESSEQVASGSSGINAAGTQGSKNYDSLSSLGEALCAASNSSEECQSTDEVSKLRKELQETLVVYDKACIDLVNVKKKIQVLSVECSEEARKVEHALEWEEALKQMVSDEKAKQLKVIIEVEQARKSFTREAYSRYKTEMATSMISQDKVQIVDAILSKSRSCRRYSKKDIELATDNFSEERKIGEGGYGNVYRCTLDHTEVAVKVIQEDSIDKTDEFLKEVEILSQLRHPNLVLLLGFCPEIGCLVYEYLENGSLEDQLFNTKGCQPLHWFLRFQVIFDVSCGLAFLHARNPEPIVHRDLKPANILLDRNYVGKIGDVGFAKLISDLVPDWQTEYKETIVAGTLYYMDPEYQQTGTVRPKSDVFALGVVILQLLTGRRPNGLIVSAENAVRNGRLSDILDRSQTDWPLDEAEMFARLGLRCTALKCRDRPDLESEVLPKLDEILHRITSAVNLRNPKLSVPSHFICPITQELMEDPHVAADGHTYEHYAIRAWLKRHKTSPVTRRKLPNSSIVPNHSLRAAIQQWKSQLPAQTNE
Length640
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.07
Grand average of hydropathy-0.355
Instability index50.20
Isoelectric point6.00
Molecular weight72030.89
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14025
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.24|      24|      31|     230|     253|       1
---------------------------------------------------------------------------
  230-  253 (41.00/28.10)	KSFTREAYSRYKTEMATSMISQDK
  263-  286 (40.24/27.45)	KSRSCRRYSKKDIELATDNFSEER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.61|      19|     194|     314|     332|       2
---------------------------------------------------------------------------
  314-  332 (30.60/20.69)	DSIDK..TDEFLKEVEILSQL
  502-  522 (29.01/19.24)	DILDRsqTDWPLDEAEMFARL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.53|      25|     194|     171|     198|       3
---------------------------------------------------------------------------
  171-  195 (39.68/29.55)	KACIDLVNVKKKIQVLSVECSEEAR
  205-  229 (37.85/20.07)	EALKQMVSDEKAKQLKVIIEVEQAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.76|      10|      26|      61|      70|       4
---------------------------------------------------------------------------
   61-   70 (17.13/10.96)	SISHETFALS
   90-   99 (17.63/11.51)	SQSHSSYSAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14025 with Med32 domain of Kingdom Viridiplantae
Unable to open file!