<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14021

Description Uncharacterized protein
SequenceMGFPPRAQVETVVVEGDGVAEALLRYMHESGVRSLVLGSASFRWFRRVLSIPDVPGTVIQATQSSCNVFVVSKRRLIMKLARYPQKSESNTNLRIESISHETFALSHRSLLFDNFASDEAQSDSFSQSHSSYSASNVVPSSESSEQVASGSSGINAAGTQGSKNYDSLSSLGEALCAASNSSEECQSTDEVSKLRKELQETLVVYDKACIDLVNVKKKIQVLSVECSEEARKVEHALEWEEALKQMVSDEKAKQLKVIIEVEQARKSFTREAYSRYKTEMATSMISQDKVQIVDAILSKSRSCRRYSKKDIELATDNFSEERKIGEGGYGNVYRCTLDHTEVAVKVIQEDSIDKTDEFLKEVEILSQLRHPNLVLLLGFCPEIGCLVYEYLENGSLEDQLFNTKGCQPLHWFLRFQVIFDVSCGLAFLHARNPEPIVHRDLKPANILLDRNYVGKIGDVGFAKLISDLVPDWQTEYKETIVAGTLYYMDPEYQQTGTVRPKSDVFALGVVILQLLTGRRPNGLIVSAENAVRNGRLSDILDRSQTDWPLDEAEMFARLGLRCTALKCRDRPDLESEVLPKLDEILHRITSAVNLRNPKLSVPSHFICPITQELMEDPHVAADGHTYEHYAIRAWLKRHKTSPVTRRKLPNSSIVPNHSLRAAIQQWKSQLPAQTNE
Length676
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.07
Grand average of hydropathy-0.344
Instability index52.46
Isoelectric point6.01
Molecular weight75933.25
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14021
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.13|      46|     224|     334|     381|       1
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  334-  381 (74.83/53.11)	RCT.LDHTEVAvkVIQEDSIDKTDEFLKEVEILSQLRHPNLVLLLGF.CP
  561-  608 (72.30/45.54)	RCTaLKCRDRP..DLESEVLPKLDEILHRITSAVNLRNPKLSVPSHFiCP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.24|      24|      31|     266|     289|       2
---------------------------------------------------------------------------
  266-  289 (41.00/26.63)	KSFTREAYSRYKTEMATSMISQDK
  299-  322 (40.24/26.02)	KSRSCRRYSKKDIELATDNFSEER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.71|      18|      31|      72|     100|       3
---------------------------------------------------------------------------
   72-   89 (30.59/33.64)	SKRRLIM.KLARYPQKSES
  106-  124 (26.12/ 7.52)	SHRSLLFdNFASDEAQSDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.53|      25|     194|     207|     234|       4
---------------------------------------------------------------------------
  207-  231 (39.68/34.69)	KACIDLVNVKKKIQVLSVECSEEAR
  241-  265 (37.85/23.52)	EALKQMVSDEKAKQLKVIIEVEQAR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14021 with Med32 domain of Kingdom Viridiplantae
Unable to open file!