<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP14020

Description Uncharacterized protein
SequenceMNSNPESEPLQSRIRALTWSETGLKKLGKIKECRDVRQTQHQIGRIENQWSKVLSIPDVPGTVIQATQSSCNVFVVSKRRLIMKLARYPQKSESNTNLRIESISHETFALSHRSLLFDNFASDEAQSDSFSQSHSSYSASNVVPSSESSEQVASGSSGINAAGTQGSKNYDSLSSLGEALCAASNSSEECQSTDEVSKLRKELQETLVVYDKACIDLVNVKKKIQVLSVECSEEARKVEHALEWEEALKQMVSDEKAKQLKVIIEVEQARKSFTREAYSRYKTEMATSMISQDKVQIVDAILSKSRSCRRYSKKDIELATDNFSEERKIGEGGYGNVYRCTLDHTEVAVKVIQEDSIDKTDEFLKEVEILSQLRHPNLVLLLGFCPEIGCLVYEYLENGSLEDQLFNTKGCQPLHWFLRFQVIFDVSCGLAFLHARNPEPIVHRDLKPANILLDRNYVGKIGDVGFAKLISDLVPDWQTEYKETIVAGTLYYMDPEYQQTGTVRPKSDVFALGVVILQLLTGRRPNGLIVSAENAVRNGRLSDILDRSQTDWPLDEAEMFARLGLRCTALKCRDRPDLESEVLPKLDEILHRITSAVNLRNPKLSVPSHFICPITQELMEDPHVAADGHTYEHYAIRAWLKRHKTSPVTRRKLPNSSIVPNHSLRAAIQQWKSQLPAQTNE
Length681
PositionTail
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Sorghinae> Sorghum.
Aromaticity0.06
Grand average of hydropathy-0.436
Instability index50.55
Isoelectric point6.24
Molecular weight76775.12
Publications
PubMed=19189423
PubMed=29161754

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP14020
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     212.04|      73|     224|     301|     386|       1
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  301-  386 (102.09/87.35)	ILSKSRSCRRYSKKDIeLatDNFSEERKIGEGG..ygnvYRCT....lDHTEVAVKViqedsIDKTDEFLKEVEILSQLRHPNLVLLLGF.CP
  529-  613 (109.96/62.06)	IVSAENAVRNGRLSDI.L..DRSQTDWPLDEAEmfarlgLRCTalkcrDRPDLESEV.....LPKLDEILHRITSAVNLRNPKLSVPSHFiCP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     127.99|      43|     222|       7|      52|       2
---------------------------------------------------------------------------
    7-   52 (67.31/53.78)	SEPLQSRIRALTWsETGLKKL...GKIKECR...DVRQTQHQIGRieNQWSK
  232-  280 (60.68/38.32)	SEEARKVEHALEW.EEALKQMvsdEKAKQLKviiEVEQARKSFTR..EAYSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.68|      21|      32|      74|     105|       4
---------------------------------------------------------------------------
   74-   94 (35.59/38.36)	FVVSKRRLIM.KLARYPQKSES
  108-  129 (31.09/11.46)	FALSHRSLLFdNFASDEAQSDS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP14020 with Med32 domain of Kingdom Viridiplantae
Unable to open file!