<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13983
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLILDNTMNGDAMQVDLDDVDDLFGDGAPLALPPRPVSKRLRQRLDDLRERGCCQGVAWSKTGTIASITPDGQQLQLRYIRAENKDATFSLSEPTTFTPWASLPGGPLVHLTWGPVNSELAVIDAAGRVLILSFHVNLNRPMLSRRWDSDPLDDSQSIVGTYWLPPNIPVTNPRSPSYTLCYAPAVKNGNGNDYKFQMSPIISTGPAHPHPSKSALICVTTSGILKMFWGQNNGKIEETTLELENVTTAEDQVTHAAICSDKTKTLMIGMVTACKQLRLVQVGMNWGTPKSEGTQNVPPVNQVLNPTLSKRHLTVTSWFEPNSNDSHLDPSISKVTHIEMLPPILNGQTKEWSPVVVLTVRSIVPGPNSPYAQEAQSIIDRWELLLDQQQTVNSAFEQLGTRRNAVGSTAPNGSRLKKLDSVVVNKVVMTVTLVNFGKVICLAYSDGSVEYRDRFTMAELYREVNLDRINSILDIGFSQSGESSCLQMALSPTKFSLVQLYENGQMKWHSINYTLADVASMTDAQISAVVAGFTISTAQAASHGANIDDILAVARNFACKESFAIDWVKALTQLMKITVDYTEDAPHDHLIKNSALQMCFSIMNYLGWKGDIKPRQALGKLSMLALNIRNIVIMITLSSNVVPINNKSTMTPLDEPEAVNALVGCVKWSTDLLCWLCDSLFCLFDDAKFMGLLKHNQSVPMMAHLNAQNEIALHLILSSATRGLLSAICRRITLLDSFSTKAISWYENRDKSNANNNPSDPRVTAHAALYAAYQKIRRYTSSTLIKADEFDKLLTGLGADIRSAYNSTLAVLGEQAARTANNGQQPQGQNAARSDASQEAIARGRQHCELSMLLLQEPPPFFVAVVDKFFNKELKEFRAHSEVAKLYFADYSILEINDGPRTLAKKRASGVRVDLFKRIEISRKPSGGTGAHGANSKAQASWRVCARCASVMEDLALINQRPGLTFLLRQQNNCSCGGRMAILPQEEAKHH |
Length | 992 |
Position | Tail |
Organism | Hypoxylon sp. CO27-5 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes>
Xylariomycetidae> Xylariales> Hypoxylaceae> Hypoxylon.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.187 |
Instability index | 40.67 |
Isoelectric point | 7.77 |
Molecular weight | 109240.65 |
Publications | PubMed=28078400
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP13983
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 55.73| 17| 42| 455| 471| 7
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455- 471 (29.24/17.82) RFTMAELYR..EVNLDRIN
495- 513 (26.50/15.54) KFSLVQLYEngQMKWHSIN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 65.60| 22| 175| 129| 160| 8
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131- 158 (32.65/42.19) LILSfhvNLNRPMLS...RRWdsdPLDDSQS
716- 740 (32.95/11.27) LILS...SATRGLLSaicRRI...TLLDSFS
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