<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13925
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MHSPGRQHAQHQDGPTARTLANLRVAGSCSCHLACSSHSDHVPSDHGDADAHHSSPHDGPHPPPCPHEHQPHLGDMVPASAVIRRTAHHLHQALTLLATAAAPPSRHHNQQQLLHQHQQFPHHYASSDKIRRDLIGLVQLAHRLLAKLAAGLSWAQHVSSAYVLSQSLWAHVQRVDVALKQSLDKMRHLNLLIAAAKHANRNPDVPTAAVVLSTGCYPFLPSPEAVFPVARGAHHHAPQHIWQHSRLDKDVDPHDPDDIDPVLIDHLNDAIRSRLILHECTVPPVFMAHHHIDGGLVSFSVPNEFAVTLSLPGGFDPTIPWTLVTLDLLDPSIFQHFDSERRTKVHEHLQERDRPWPARTTPPSTPPNLPSPFDLPLIELYHMLHHIFLSMRLEALYFQAGTRDRSSGALAAIGDPEFDLASKSMHIRLWWGTFNAQSIFISTTTAAQELLFNASQHSSLSPVPLLSTTPTLCAVGAKKATSSTLHFQSTNLVMQFGPLRISIPPRISLESLVTWCMSDYAPSALVTQNRLAGDHIILPDHGLAIAIHRTTGQFSVVPLDRFHTDLKLVLDMLNKAPWALPEILHALTMSQRLGNLEASLSFDGLEPCPQDTPLTPNNRIVIDGLDLGPIRLARVLQLPYDPEYRLYLSMETFPTTKAFIVRWGPEEKRIIHEFFYGPACTSWNGAWLKIDPSAILLRPAIQLMVSFMSVTVHVNSRLPLTLTILFSRSIPGLSSALLTKSCPSVSELINYTFKCFGLVSLLAFLPTAATSIGRANFDSCTIDLNLPTGDSVTLQPTDPLVIKTPSSTALPGVRFPPFESTNPHIALPEHPESCLVVQGPKSPQGRDVAVSLVFAIPSPRVVSGPEYVPLVYSWSGSVVSPWDSKDGFEGSDDDDMIMNPSAVLAMLGMGDANSSPKGSDEASAATNGSGSMHELKPTVHELLAEIKGESITQSTSEDSLLWSLTRLIQRWRGT |
Length | 974 |
Position | Tail |
Organism | Catenaria anguillulae PL171 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Blastocladiomycota>
Blastocladiomycota incertae sedis> Blastocladiomycetes> Blastocladiales>
Catenariaceae> Catenaria.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.112 |
Instability index | 54.90 |
Isoelectric point | 6.32 |
Molecular weight | 106830.56 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP13925
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 126.08| 35| 53| 226| 261| 1
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226- 261 (64.99/36.21) VFPVARgAHHHAPQHIWQHSRLDK.DVDPHDPDDIDP
282- 317 (61.09/29.86) VPPVFM.AHHHIDGGLVSFSVPNEfAVTLSLPGGFDP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 72.41| 14| 35| 568| 581| 2
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568- 581 (25.11/13.38) LVLDMLNKAPWALP
600- 613 (25.64/13.82) LSFDGLEPCPQDTP
620- 633 (21.66/10.45) IVIDGLDLGPIRLA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 120.77| 37| 188| 638| 685| 3
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638- 685 (58.49/66.24) LPYDPEYRLYL.............SMeTFPTTKAFIVRwGPEekriiheffYGPACTSWNG
827- 876 (62.28/39.50) LPEHPESCLVVqgpkspqgrdvavSL.VFAIPSPRVVS.GPE.........YVPLVYSWSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 171.93| 57| 188| 494| 559| 5
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494- 559 (89.11/71.16) MQFGPLRISIPPRISLeslvtwcMSDYAPSALVTQNRLAGDHIIL.....PdhGLAIA............IHRTTGQFSVVPL
688- 761 (82.82/46.79) LKIDPSAILLRPAIQL.......MVSFMSVTVHVNSRLPLTLTILfsrsiP..GLSSAlltkscpsvselINYTFKCFGLVSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 147.67| 40| 53| 87| 132| 7
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63- 85 (27.55/ 7.78) ................PPC..PH............EH.Q..PHlgdMVPAS.AVIRR
87- 132 (71.39/44.01) AHHlhqaltLLATAAAPPS..RHHNQ....QQLLHQH.QQFPH...HYASS.DKIRR
141- 188 (48.73/21.30) AHR......LLAKLAAGLSwaQHVSSayvlSQSLWAHvQRVDV...ALKQSlDKMRH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.38| 19| 19| 778| 796| 9
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778- 796 (33.50/17.16) DSCTIDLNLPTG.DSVTLQP
798- 817 (29.87/14.51) DPLVIKTPSSTAlPGVRFPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 72.43| 24| 256| 190| 220| 10
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190- 220 (29.09/29.21) NLLIAAAKHANRNPdVPtaavVLSTGcyPFL
449- 472 (43.34/20.24) ELLFNASQHSSLSP.VP....LLSTT..PTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.29| 19| 25| 883| 901| 11
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883- 901 (35.33/24.56) DSKDGFEGSDDDDMIMNPS
911- 929 (31.96/21.46) DANSSPKGSDEASAATNGS
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