<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13923

Description Uncharacterized protein
SequenceMAQVMHLEQYRLSQEAARCFDDDLDFCPSLTAKELSEIILASILAQKEKQQQQQQQQQQQQQQQQQQQQHHHHHRASSTSPKASAATAGLPSRAVTIVDPNSRTPLYIPPTPNNVAKAFNGATATPISRSGRYSGSTTPATAGLMAQSDSYFNIMPTMTRHQQQQQQQQQLFNSMYGSHAYQYPPQIHQHQHQHQHQHQHQHQQQAYTMSMASPTMASYSPPRSANRIPIVNPDNGSIVNIPEGSASSPVWHQHHFVAVR
Length260
PositionTail
OrganismLobosporangium transversale
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina> Mortierellomycetes> Mortierellales> Mortierellaceae> Lobosporangium.
Aromaticity0.06
Grand average of hydropathy-0.905
Instability index69.08
Isoelectric point8.93
Molecular weight29260.01
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13923
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     101.35|      17|     109|      43|      59|       1
---------------------------------------------------------------------------
   43-   59 (32.33/ 7.07)	ILAQKEKQQQQQQQQQQ
  154-  170 (34.67/ 7.95)	IMPTMTRHQQQQQQQQQ
  179-  195 (34.35/ 7.83)	HAYQYPPQIHQHQHQHQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     152.25|      46|     131|      60|     109|       2
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   60-  109 (69.59/32.67)	QQQQQQQQQQhhHHHrASSTSPK.ASAATAGLPSRaVTIVDPNSRTPLYIP
  196-  242 (82.66/28.93)	HQHQHQHQQQ..AYT.MSMASPTmASYSPPRSANR.IPIVNPDNGSIVNIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.07|      12|      17|     122|     133|       3
---------------------------------------------------------------------------
  122-  133 (21.78/11.70)	ATATPISRSGRY
  140-  151 (21.29/11.31)	ATAGLMAQSDSY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13923 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ILAQKEKQQQQQQQQQQQQQQQQQQQQHHHHHRASSTSPKASAATAGLPSRAVTIVDPNSRTPLYIPPTPNNVAKAFNGATATPISRSGRYSGSTTPATAGLMAQSDSYFNIMPTMTRHQQQQQQQQQLFNSMYGSHAYQYPPQIHQHQHQHQHQHQHQHQQQAYTMSMASPTMASYSPPRSANRIPIVNPDNGSIVNIPEGSA
43
246










Molecular Recognition Features






MoRF SequenceStartStop




NANANA