<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13917

Description Uncharacterized protein
SequenceMLSVPPMTTIMSTTTKTMTNQGSRGRRGSDCIGYPHKNRKPGTELFSGQLFLKHLLSSCILLTLLCSRSLAQSPSPATSSPVTSPLAASPPVAPFPVNSAAYARTATKLYIVGGITGNLVYSQFFSLDLAVPWNASTPAWQRLADGPRQHLFPAVFSADQKTMITFHSGSTFAMRYNVDSDTWYPSKTVAEFGVLQGVGAVTDLSTGLVYMAAGYTAMRSQMSVYNFKKDAISSSPNPLPQENTLFKARAYYGNVWSKHRNSILYFGGYDTALKALPQDNVVTEYVPTSGLWQTLSTTGVPPPMRADHCMATNDDGTLMVVYGGRLSSTRGYAGDIYILDIVTQTWRCGTTGPIRAYAACTIAGNQLLVWGGRVNDKDIVDQDVLIYDLERDQWVKNYIPPSSYNNKNQTSPEKPGSVGPDYGYPDNSNESSSSSHTGAIAGGVIGGIAVVAATILLFVFLRRRQHRTHGAKLVNTKDDEDPDGNPTSGAHAEGARNEQELRDLRVRLQNQQEELELHRRLLLLQQDPQQQQQQQQQQQQQQQQQQQQHSPYLPPSYSYQPPIFFGVAPSTASDPYVAINNPYTHSTEVPIAVGQYHGASPSSPLPSYAPHPYQSISSPAPSHIMIATDVITTSPPPSRTPSRINSATSFHDTSSEGSSTQLRSQRPPGNPQVGARDRLLSQSNP
Length685
PositionTail
OrganismLobosporangium transversale
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina> Mortierellomycetes> Mortierellales> Mortierellaceae> Lobosporangium.
Aromaticity0.08
Grand average of hydropathy-0.455
Instability index56.80
Isoelectric point8.52
Molecular weight74733.69
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13917
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.65|      23|      48|     299|     323|       1
---------------------------------------------------------------------------
  299-  323 (41.60/29.03)	GVPPPMRA.DHCmaTNDDGTLMVVYG
  349-  372 (39.05/21.14)	GTTGPIRAyAAC..TIAGNQLLVWGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.17|      23|      52|     555|     578|       2
---------------------------------------------------------------------------
  553-  576 (41.55/19.36)	L....pPSYSYQPPI....FFGVAPST.....ASDPY
  577-  613 (28.62/12.42)	VainnpYTHSTEVPIavgqYHGASPSSplpsyAPHPY
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13917 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DPYVAINNPYTHSTEVPIAVGQYHGASPSSPLPSYAPHPYQSISSPAPSHIMIATDVITTSPPPSRTPSRINSATSFHDTSSEGSSTQLRSQRPPGNPQVGARDRLLSQSNP
2) ELHRRLLLLQQDPQQQQQQQQQQQQQQQQQQQQHSPYLPPSYSYQP
3) PPMTTIMSTTTKTMTNQGSRGRRGSDCIGY
4) THGAKLVNTKDDEDPDGNPTSGAHAEGARNEQELRDLRVRLQN
5) YIPPSSYNNKNQTSPEKPGSVGPDYGYPDNSNESSSSSHTG
574
516
5
468
398
685
561
34
510
438










Molecular Recognition Features






MoRF SequenceStartStop




NANANA