<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13906

Description Uncharacterized protein
SequenceMQNEQSVAFGSLERKLLSFLPPNLSVDGLYSSLRHGSLQRPIAWSYKNVALVPSWVPDKKVPGLMNPSLRMFSLLISEGGKGRLWDTCMEDISMVHGQSRLTHTLWDPSANHFATIDEKGKIVIWTNKRYLNAWLPAYMVVLFAPVVCCEWINPERMYVASKTDGTTKYEREKTGRPRNPMTLLVLTSDGQLTEIFKPAAGVYTHVSINLPRRSIIEDVTTSRITHGSMLSGVDGIHLITHHGDILPSTVNMYQIDLRFQPELVFRCEALAILHISNPLTGPGSIMTPGVMLHLKLLPPIATRPLSIAIALASMEENLNGENTYKCQVVVWDVAPKVMGFHPAFQGLSTRRNDAVSGQSSLTFVLLGERRFDGKFISTLNFVPKTRELLVGFSDGSVLGLESRFPGLSDSTQTLLEGFRLPKDETSAVAISPSPNGLYLLCSFLDGKISTIDTSETTGYDLDMETIIQYTVLALLNDIDYSDIVAVIVKAARISGDDQLPDRFLEGVFKSYEHIKGVEDSSMLEPFMPKASVMRRMLSLQLVLFQALPKKIVQYRLTNALLHLQSIGETLSGCCTSDPATLAAHLDPASNMILGQKPLAFDINSLWSLFPLCGWALDFCTILFRELLVFLEMRTPNPAGTTTSTSALLQGVLQGQSSHSLAVGSAMIPKPTLLSFLYHSRARNTLWNVLVLVEQFHQYIRIRDQLYQRVRHANSAIDGPSGPGQEKPNHTNSMSIPEAFAMKELHSLTLSQYVEAAFTRCPIKIGTIKPLLRELNSIGNQADVKSVNGGASTLLDRTASDHMIFIKGIPPFINNNSSLAQAKAELRTIVRKYPTLWDMNRLVFANIHWLDLEPADVLRPVSLSSDVSSKVSPRERTLAMHPARCRIDPVTALKTRGLGHGGTLSSTTGLSGRGPHSTLQHHISNVSTTSNISAGSRGSIDGQISGRTNTLPSKTYTDSPSELPQQLRQPSVSQPFTDGTSLMMNTVGSGSHGTVGGGSFDLGNSPVDPGSIWGIALDESDDDWEEARPSYNRIEAHVDSSEIIKSIWRNWTPALQAQQPSLPGYDHDDIGKDEDRIDAEPVPDDDVLLEDEGEEDEDRYSDEDMQDTALLYNGVRRDSKGGVGGAGVDVPNRSRRPSLATALTPSCQWLLQESQSITKRTRSEWTVFPILNDHRPYTGDITGSGQGGSGSGIGANSREMKNSHQLAWVGLRGHLTPLDLQPTENLSYIRSQADIEAQVRKRRFGVDPIRKVKKYKTTGNGRRCIRCHQVAMSNTNNRSVSGGPNNVRRPILPHQIGSTPTVIPDIAASTLWYHNYDRSCICGGMWLEL
Length1328
PositionTail
OrganismLobosporangium transversale
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mortierellomycotina> Mortierellomycetes> Mortierellales> Mortierellaceae> Lobosporangium.
Aromaticity0.07
Grand average of hydropathy-0.243
Instability index42.64
Isoelectric point6.56
Molecular weight146291.75
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13906
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.34|      30|     122|     979|    1008|       1
---------------------------------------------------------------------------
  979- 1008 (56.55/33.75)	TSLMMNTVGSGSHGTVGGGSFDLGNSPVDP
 1107- 1136 (54.79/32.45)	TALLYNGVRRDSKGGVGGAGVDVPNRSRRP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     184.06|      44|     122|     379|     422|       2
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  335-  373 (46.74/24.86)	....PK......VMGFHP.AFQGLS.TRrndaVS.GQSSLTFVLLGERRFDG
  379-  422 (74.76/44.51)	LNFVPKTRE..LLVGFSDGSVLGLE.SR....FP.GLSDSTQTLLEGFRLPK
  428-  458 (24.85/ 9.50)	VAISPSPNGlyLLCSFLDGKISTIDtSE....TT.G................
  624-  654 (37.71/18.52)	.......RE..LLV......FLEMR.TP....NPaGTTTSTSALLQGV.LQG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.21|      18|      20|    1062|    1079|       4
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 1062- 1079 (34.50/21.58)	PGYD...HDDIGKDEDRIDAE
 1082- 1102 (28.72/16.74)	PDDDvllEDEGEEDEDRYSDE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.76|      18|      18|      84|     101|       5
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   84-  101 (33.13/22.43)	LWDTCMEDISMVHGQSRL
  105-  122 (31.63/21.05)	LWDPSANHFATIDEKGKI
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     173.26|      47|     205|     498|     568|       6
---------------------------------------------------------------------------
  498-  544 (79.02/38.64)	QLPDRFLEGVFKSY......EH...IKGVEDSSMLEP......FMPKASVMRRMLSLQLVLF
  700-  752 (70.14/32.31)	RIRDQLYQRVRHAN......SA...IDGPSGPGQEKPnhtnsmSIPEAFAMKELHSLTLSQY
  780-  816 (24.10/35.39)	QADVKSVNGGASTLldrtasDHmifIKGI......PP......FINNNS.............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.62|      13|     204|      26|      38|       7
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   26-   38 (24.98/16.90)	VDGLYS.SLRHGSL
   61-   74 (20.64/12.42)	VPGLMNpSLRMFSL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.86|      16|      19|     913|     928|       9
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  913-  928 (28.61/14.65)	GPHSTLQHHISNVSTT
  934-  949 (27.25/13.63)	GSRGSIDGQISGRTNT
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.46|      25|     286|     271|     314|      12
---------------------------------------------------------------------------
  239-  266 (39.90/35.06)	ITHHGDILPSTVNMyqiDLRFQPELVFR
  279-  303 (44.56/41.43)	LTGPGSIMTPGVML...HLKLLPPIATR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13906 with Med16 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LQAQQPSLPGYDHDDIGKDEDRIDAEPVPDDDVLLEDEGEEDEDRYSDEDMQDTALLYNGVR
2) RGLGHGGTLSSTTGLSGRGPHSTLQHHISNVSTTSNISAGSRGSIDGQISGRTNTLPSKTYTDSPSELPQQLRQPSVSQPFTDGTSLMMNTVGSGSHGTVGGGSFDLGNSPVDPGSIWGIALDESDDDWEEARPSYNRIEA
1054
895
1115
1035










Molecular Recognition Features






MoRF SequenceStartStop




1) IWGIAL
1011
1016