<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13896
Description |
Mediator of RNA polymerase II transcription subunit 31 |
Sequence | MTTKEDKERFQLELEFVQMLSNPLYLHWLAQEGYFNKPEFINYLEYLKYWKKEEYSKFIMFPYCLAILDLLQHKEFRDSLANNDFAMNIHKKQFNHWKYYRYSKNRSLKSSF |
Length | 112 |
Position | Middle |
Organism | Neocallimastix californiae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Chytridiomycota>
Chytridiomycota incertae sedis> Neocallimastigomycetes> Neocallimastigales>
Neocallimastigaceae> Neocallimastix.
|
Aromaticity | 0.21 |
Grand average of hydropathy | -0.743 |
Instability index | 39.74 |
Isoelectric point | 8.87 |
Molecular weight | 14032.96 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364129
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP13896
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 45.52| 11| 45| 47| 57| 1
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47- 57 (21.41/ 9.13) LKYWKKEEYSK
94- 104 (24.10/10.95) FNHWKYYRYSK
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