Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSSSSRPANGSQPSGSTTTAAPRPLNPQLGSEPWFAYPTPTPEDLRSELPPYLEDVENVRLGLVLDRLVRKSYGDLRVLLQQTLPATLETHHKPKQIINYAKQTRQAVLKYLAIIRWKNAVDIHISGGPPISHQNNGPAASFPTPQTNGESNDTSPAGVGYVGKGKGRMVDDEPKVNVARGKVTDAKRITHFMEHQNRQHELAIEHLRHTTKGIESLRFRNADLLTAISLLTLGTYPRLPTNLTEPFTPRKPLTNASVLRTLRQLDSHILYRLRCIEYLPPELEVYRIADGRAYVRGGGPGGWKAELTVVGFDDGEDSRWWLTGVEWGWKLKKRGTDDPGGTTGKRFEGEQLQGILDVANVDVLPPRPVQTEVNVVVTDTDAGGKETPGQGTVRTIAERRKRLVDAPLVRIYNFLQQLSLSYQLEMLFSEALALSQGRWRGQLLVQMDRDKKELKLKYWIRPRPPPVQQQTQAAVGKRPAPPVASSSSRTPLTGGTLTVSLSEATEPLSDRGSLTAEISADGRISSERILRLGIVVKWEVGEAGVGGGLKTGDALDSSELKIDSNALSIENILNLASRTHASLLTRHHTAALLAAPRIALFPADPPQLVETDNTTRPLALRIPLPSRQRQAHLLIGVSSLTGLIEIEDSGSTDSSATSPEDRGGRAKLATVSANERGRLMEDVGRLLVAVITENLEAQFRQLGCHPARRIPLRSQDMAKNELHPASTVFVPLPTSELHHLTARVAGQGVAFELVKLVRSPSEAGLGMKLAIGDRSPVDLVRLRARRKDRKGANPGKRAREADQLVVETSVNNVSPPDWQIDDRDLRDVFIFANALVAQTIVEQQLKDRSIPYSLHYPPASGSGSPRSSSAVAGMVPTLLVDAGDLLKDGRAADVAMPRVYMQIREWWKGDKCSVVTVIHLQHKPALSSSGASPATSAPLSTAAMSEGITFDQTSSIVRFSAPDISRCVPSLLEQWERLCKVIVVAGEVNKLNKADAFKGLRMLSFDLRTATMMYSPGFCASITYNPSSDSYEVSFFRSGFSSGTTPGIQAIATPAISIDGTADASPHQFIAPLLGNRLNEMTVQGRRGSVAREWIALLRWTLPFLLEVESIRSASSTAEFPALVVRGVSEFKLIWDVEGVRRYGLDWKLVRNGRWIVKDACLSDDQSCGIITPIPGWKERVVEDAFQRLKSTDRDKDKTDGQGSGDGTTTTTGTSVLAVKVDGGAGLMCDGKIVGDIVRGVCADVENILGMS |
Length | 1252 |
Position | Tail |
Organism | Naematelia encephala |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Tremellomycetes> Tremellales> Naemateliaceae> Naematelia. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.298 |
Instability index | 47.18 |
Isoelectric point | 9.01 |
Molecular weight | 136518.76 |
Publications |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP13821 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 80.18| 22| 23| 282| 304| 1 --------------------------------------------------------------------------- 282- 304 (38.62/24.63) ELEVYRIADG...RAYVRgGGPGGWK 306- 330 (41.57/22.03) ELTVVGFDDGedsRWWLT.GVEWGWK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 38.04| 12| 15| 491| 502| 2 --------------------------------------------------------------------------- 491- 502 (21.27/11.20) PLTG.GTLTVSLS 507- 519 (16.76/ 7.28) PLSDrGSLTAEIS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 72.40| 19| 23| 7| 29| 3 --------------------------------------------------------------------------- 10- 28 (34.92/17.86) GSQPSGSTTTAAPRPLNPQ 30- 48 (37.48/15.95) GSEPWFAYPTPTPEDLRSE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 51.63| 17| 23| 740| 756| 5 --------------------------------------------------------------------------- 740- 756 (27.14/17.36) LTARVA.GQGVAFELVKL 765- 782 (24.49/14.83) LGMKLAiGDRSPVDLVRL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 61.39| 18| 19| 149| 166| 7 --------------------------------------------------------------------------- 134- 151 (29.56/16.36) QNNGPAASFPTPQTNGES 152- 169 (31.83/18.22) NDTSPAGVGYVGKGKGRM --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 44.25| 13| 19| 705| 717| 8 --------------------------------------------------------------------------- 705- 717 (25.12/14.50) HPARR..IPLRSQDM 723- 737 (19.13/ 9.19) HPASTvfVPLPTSEL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.01| 12| 19| 1013| 1026| 9 --------------------------------------------------------------------------- 1013- 1026 (19.96/18.32) MYSPGFCASITynP 1035- 1046 (23.05/12.78) FFRSGFSSGTT..P --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 52.18| 17| 23| 583| 600| 10 --------------------------------------------------------------------------- 583- 600 (23.15/16.03) LLTRHHTAALLAApRIAL 608- 624 (29.03/15.16) LVETDNTTRPLAL.RIPL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 42.70| 14| 18| 81| 98| 11 --------------------------------------------------------------------------- 81- 98 (19.29/26.40) QQTLPATLethhKPKQII 102- 115 (23.41/16.17) KQTRQAVL....KYLAII --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 34.96| 11| 18| 664| 674| 12 --------------------------------------------------------------------------- 664- 674 (17.47/11.47) GRAKLATVSAN 684- 694 (17.50/11.50) GRLLVAVITEN --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EPWFAYPTP 2) LKLKYWIRPRP | 32 454 | 40 464 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab