<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13721
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MNGDDKLINDLSINSIQNDFDLLPKNEANLIPLKLIYERVIQNYYSDLTTLSETIQTKSNEQKKIEIFKFVQSLNQSAIKLLVLIRWAKKSRDVLKCKNICDFLEVQNSYFRGAADALHMVHQEMNAARIPSFDIPTAVDVLTTGTYSRLPTIIKEPISLPPLKTEEIKDAIEKLEDVTRLRLLCDEIIPKPMKKNYVIKNGSVRFTVENEFEATLKLEGKQQDNWRLLDLKIFVKPDDDLNHELIMPLQEYQLNNLKINAQNAISTDVIPLAENATLINSTQNPTNNQASSSSSTEETKPKKKWPLIELYRYLHSFCLSMHLEIFSLQIDYLIKTRWANQLRLNISPDKKTLQIYYWMANDFKNKQSKANILELSISTAEDKIVFYTNKEHTEEETNSSLIAKSLIYEYEKFIQCKLNIKCYQLLENGTKKELIDPLTSSSIKFDINSQKLNIERILERVTEIHAFSILYELRNILLGKSNTKIAVHKCNPNDIIEKNFYNSETTDEQKDKLQPELIICYRINHYIKITVDERTGRIVVTEYNEQGTDNINSFIQEKIKIVEDEINKDMTNAVEHLMNLRKLIIINEIELLSIYIGLEPSKKLLINQEESKRLINNNELFQSQNIIYLRYPNYPNYYIIIYIDNEAINSTKKYKHDISYFKVWLVSTQKKDPLEFLGFTLIMNLDISQLLEDSNDSDNDIENDDFFHHRKRRCTEEPSVWDKTKNLTLDLEILSKIEAACRYKIAYSLLTTQLKNLHIPYYFVSTKSNNHAINFDSPLSVFDLIIKIRVKDIIPDVIRKCFLGDYILKLNNDLYITATGNTLNKENNSIPFEKFSIKNPVKGIARGIEVVAKYQVKPGELPINEDFSIGDISFSNKTKVLTFTYNKINNCIYKILNIWKGLLLLRIIASQAYTNKDILQSNGMSIDKINLLKTKILFHEKNFVEFALNSSLDSSNSSGINIIFGIKGEKTPIFYEEKQFLVEDFLKDYNVINFLLKLKTKYKLFKNINAIKKSREQIDLYSPLKIEKKSLEKIKMIYNNQYIIEIGQIADNLVGILYSDNSINDIRNLTTRNIPPIILPQFNRFIDFVTQLVITGGKSQQENSIIKSENDQGNMDENQKDSVCLKIPNGIIFDIRYIDEVMVELQKIMNSVSYMDWLYAAIPQIEQTKASPQKGSISYSKNSTDPLYLIYNGQSFELSINYDFKMNKWTMHLKVNNEDINSEILIKKILNLANPIIGFKSLTQLMLLPPDIAKEILDLINTESKPNDKGVTSEICLTIPEGLPSYLPRSGESAICSDFQNKRVGLFCHITYNDTSVNGVEGTKHSLIIPFFYNWESRFFCEWDINPEISKLKTFEECKTLLQSQSQNDSNRFSKLNLLLVNISMAKEQKGEKEPIKFAFTTLNSMTPEQYKVLEFRNN |
Length | 1419 |
Position | Tail |
Organism | Piromyces finnis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Fungi incertae sedis> Chytridiomycota>
Chytridiomycota incertae sedis> Neocallimastigomycetes> Neocallimastigales>
Neocallimastigaceae> Piromyces.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.351 |
Instability index | 40.71 |
Isoelectric point | 6.43 |
Molecular weight | 164391.07 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
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GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP13721
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 1639.68| 416| 420| 554| 973| 1
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154- 540 (447.13/274.85) .IKEPISLppLKTEEIKD...AIEKLEDVT...RL...........RLLCDEIIPKPMKKNYVIKNGSVRFTVEN...EFEA.TLKLEGKQQD.NWRLLDLKIFV...........KPDDD...................LNHELIMPLQEYQLNNLKINAQN...AIstdviplaENATLINST..QNPTNNQASSSSSTEEtkpkkkwplielyrylhsfcLSMHLEIFSlQIDYLIKTRWANQLrlnISPDKKTLQI.YYWM.ANDFKNK....QSKANILELSISTAEDKIV...............FYTNKEHTEEETNSSLIAKSLIYEYEKFiQCKLNIK..........CYQLleNGTKKELIDPLTSSSIKFDinsqklNIERIL.......ERVTEihafsILYELRNILLGKSNTKIA...VHKCNPN.DIIEKNFYNSETTDEQKDKL..QP.ELIICYRINH.........yIKITV.DE......RTGRIVV
554- 973 (662.93/428.39) FIQEKIKI..VEDEINKDMtNAVEHLMNLR...KLI.IINEI....ELLSIYIGLEPSKKLLINQEESKRLINNN...ELFQ.SQNIIYLRYP.NYPNYYIIIYIDNEAINST..KKYKHDISyFKVWLVSTQKKDPLEfLGFTLIMNLDISQLLEDSNDSDN...DI........ENDDFFHHR..KRRCTEEPSVWDKTKN....................LTLDLEILS.KIEAACRYKIAYSL...LTTQLKNLHIPYYFV.STKSNNHAINFDSPLSVFDLIIKIRVKDIIPDV.IRKCF.LGDYILKLNNDLYITATGNTLNKENNSIPFEKF.SIKNPVKGIARGIEVVAKYQV..KPGELPINEDFSIGDISFS......NKTKVLTF...TYNKINN.....CIYKILNIWKGLLLLRII...ASQAYTNKDILQSNGMSIDKINLLKTKIlFHE.KNFVEFALNSSLDSSNSSG.INIIF.GI......KGEKTPI
974- 1396 (529.63/327.28) FYEEKQFL..VEDFL.KDY.NVINFLLKLKtkyKLFkNINAIkksrEQIDLYSPLKIEKKSL...EKIKMIYNNQyiiEIGQiADNLVGILYSdNSIND..IRNLTTRNIPPIilPQFNRFID.FVTQLVITGGKSQQE....NSIIKSENDQGNMDENQKDSvclKI........PNGIIFDIRyiDEVMVELQKIMNSVSY....................MDWLYAAIP.QIEQTKASPQKGSI....SYS.KNSTDPLYLIyNGQSFELSINYDFKMNKWTMHLKVNNEDINSEIlIKKILnLANPIIGFKSLTQLMLLPPDIAKEILDL.INTE.SKPND.KGVTSEICLTIPEGL...PSYLPRSGESAICS.DFQ......NK.RVGLFchiTYN..DT.....SVNGV.EGTKHSLIIPFFynwESRFFCEWDI...N.PEISK...LKT...FEEcKTLLQ..SQSQNDSNRFSK.LNLLLvNIsmakeqKGEKEPI
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