<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13693

Description Heat shock protein 70 family protein
SequenceMAGKGEGPAVGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRKFSDPSVQSDIKLWPFEVVPGAADKPMINVMHKGEKKQFAAEEVSSMVLVKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKSTSQGEKNVMIFDLGGGTFDVSLLTIEEGIFEVKSTSGDTHLGGEDFDNRMVNHFVQEFKRKYKKDISGNARALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDMFRKCMDPVEKCLRDAKMDKAQVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERSRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQDAEKYKAEDEEHKKKVEHKNALENYAYNMRNTIKDDKIAGKIDAADKEKIETAVDGVIEWLDHNQLAEADEFEDKMKELEGICNPIISKMYQGGGAAPGGGAEYDDGADAGAHAGSTGPGPKIEEVD
Length653
PositionUnknown
OrganismKlebsormidium nitens (Green alga) (Ulothrix nitens)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Klebsormidiophyceae> Klebsormidiales> Klebsormidiaceae> Klebsormidium.
Aromaticity0.06
Grand average of hydropathy-0.441
Instability index32.67
Isoelectric point5.16
Molecular weight71497.99
Publications
PubMed=24865297

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13693
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     149.75|      52|     188|     170|     225|       1
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  170-  225 (76.10/64.80)	GLNVMRIINePTaAAIAYGLD.KKSTSQGEKNVMIFDLggGTFDV...SL.LTIEEGIFEV
  362-  418 (73.65/47.36)	GKELCKSIN.PD.EAVAYGAAvQAAILSGEGNEKVQDL..LLLDVtplSLgLETAGGVMTV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.27|      18|      21|      38|      55|       2
---------------------------------------------------------------------------
   16-   33 (19.08/ 9.65)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.67/21.27)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.52/14.30)	NQvaMNPTNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     255.09|      69|     468|     101|     169|       3
---------------------------------------------------------------------------
  101-  169 (117.36/79.38)	AADKPMINVMHKG.....EKKQFA.AEEVSSMV..LV.KMK.E........IAEAYLGSTIKNAVVTVPAYFNDSQRQATKD...AGVIA
  512-  569 (62.34/38.54)	..................DKGRLS.KEEIEKMVqdAE.KYKaE........DEEHKKKVEHKNAL.ENYAY...NMRNTIKDdkiAGKID
  570-  640 (75.39/48.23)	AADKEKIETAVDGviewlDHNQLAeADEFE.......dKMK.ElegicnpiISKMYQGG...GAAPGGGAEYDDGA.....D...AGAHA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13693 with Med37 domain of Kingdom Viridiplantae
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