<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13692

Description Molecular chaperones HSP70/HSC70
SequenceMGRLQGWTSLILLAALFAVTYAADEANPLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGSRITPSWVAFTDTERLIGEAAKNQAAQNHERTVFDVKRLIGRKFSDKDVQRDLKLLPYKIINKESKPNIEVKLKDGEVKVFSPEEISAMILIKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKQGEKNILVFDLGGGTFDVSILTIDGGVFEVVSTNGDTHLGGEDFDQRIMEYFIKLIKKKYNKDISKDNRALGKLRREAERAKRALSNQHQVRVEIESLFDGTDLSEPLTRARFEELNNDLFKKTMGPVKKAMDDAGFKKTDIDEIVLVGGSTRIPKVQQLIKEFFDGKEPNKGINPDEAVAYGAAVQGGILSGEGGEETKDLLLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCHELGKFDLSGIPPAPRGVPQIEVTFEVDANGILSVSAEDKGTGKAEKITITNDKGRLSQEDIERMVAEAEEFAEEDKKIKERIDARNHLETYVYNMKNTINDSDKLGDKISEDDKESIEAAIKDTLEWMDDNQSADKEEYEEKLKEVEGVCNPIISKLYQAAGPGAGGADEDEDVEHDEL
Length659
PositionUnknown
OrganismKlebsormidium nitens (Green alga) (Ulothrix nitens)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Klebsormidiophyceae> Klebsormidiales> Klebsormidiaceae> Klebsormidium.
Aromaticity0.06
Grand average of hydropathy-0.440
Instability index29.18
Isoelectric point4.91
Molecular weight72613.19
Publications
PubMed=24865297

Function

Annotated function 
GO - Cellular Component
endoplasmic reticulum	GO:0005783	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13692
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.24|      16|      20|      72|      90|       1
---------------------------------------------------------------------------
   72-   87 (26.16/22.35)	DTERLIGEAAKNQAAQ
   95-  110 (27.08/12.84)	DVKRLIGRKFSDKDVQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.30|      11|      26|     226|     236|       2
---------------------------------------------------------------------------
  226-  236 (20.46/10.88)	LGGGTFDVSIL
  254-  264 (21.85/12.06)	LGGEDFDQRIM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.75|      26|     193|     200|     225|       3
---------------------------------------------------------------------------
  200-  225 (46.01/27.76)	INEPTA....AAIAYG.LDKKQGE..KNILVFD
  389-  421 (30.74/16.19)	INPDEAvaygAAVQGGiLSGEGGEetKDLLLLD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.15|      17|      19|     587|     603|       5
---------------------------------------------------------------------------
  587-  603 (26.96/14.79)	DKISEDDKESIEAAIKD
  609-  625 (28.19/15.77)	DDNQSADKEEYEEKLKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.15|      21|      21|     314|     334|       9
---------------------------------------------------------------------------
  314-  334 (35.50/21.43)	FDGT..DLSEPLTRARFEELNND
  336-  358 (30.65/17.56)	FKKTmgPVKKAMDDAGFKKTDID
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.29|      18|      22|     495|     513|      10
---------------------------------------------------------------------------
  495-  513 (27.10/21.32)	RGVPQIE.VTFEVDaNGILS
  519-  537 (26.19/15.46)	KGTGKAEkITITND.KGRLS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13692 with Med37 domain of Kingdom Viridiplantae
Unable to open file!