Description | Pre-mRNA-processing protein |
Sequence | MGQNHFQRPTPSNGPPMQRPLGGSSGPPPTGQPGAPFGQPARQAPPGNPSAPFLRPPPQHLPMQQPQGLAPPSSQVRPGPPSSSTAGPAPQRPPQQFSLPPRPFSPGPPSNFRPPVWGLPPRGGPPLQQGPPPAFAPGGRPPMQWPPGHPGMVRPGGFPASGPRLQGASTGVNSVQGGPGELNSTQGGAGSPAGQKAEAGKDEGKKEMGTESEEVRKAWSAHKNDEGVAYYYNSVTGESTYEKPKGFVGEEVDIIPVAWERIDGTDWHLVTTNLDSKYYYNTTTQETSWQVPAAVAEQRQKKAEEASVPDRANGESAVGTIKKKLHEEDAIAEVGKETPPEKDGKDEEGNGAEQKQSEKEKLAADFKEMLKEKKVPPFAKWDKELPKIFADPRFKAIATTAERRALFDRYVKTRAEEERLEKREALRAAMNGFRELLDEVAEELDHTVTYADFETMKGDDPRFKALEKKERETLLNERIAPLRKAEEERLRKEREAAVTAFHELLAEKGANETTKWATLKEEVREDPRYKAVARNEREQVFNDFLAKWKGGKESEVEEKLKAHEREARKRKEREEEELERIRTKARQKDALDSYKAILAQKVKEADATWADWRRRIEKEAEEKQVTPHLEAKELEHLFKEHVRGIMDACVRDYKRLLAEALPEETIQKEDPDGRIPLDSWTAAKGLMREDARLKRLPKVEREPLYRQYTEDVRKRLNLPPGANYVRDRGPAGARPPAAEPRRETYREHRDKRPRR |
Length | 755 |
Position | Unknown |
Organism | Klebsormidium nitens (Green alga) (Ulothrix nitens) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Klebsormidiophyceae> Klebsormidiales> Klebsormidiaceae> Klebsormidium. |
Aromaticity | 0.06 |
Grand average of hydropathy | -1.112 |
Instability index | 46.40 |
Isoelectric point | 8.69 |
Molecular weight | 84767.04 |
Publications | PubMed=24865297 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP13685 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 6| 430.44| 67| 67| 414| 480| 1 --------------------------------------------------------------------------- 293- 332 (35.36/15.50) ..................AAVAE....QRQ...KK.......AEEAsvpDR....ANGESAVG...........................TIKKK.LHE...EDAIA 333- 412 (68.40/37.80) EVGKETPPE..KDGKD..EEGNG....AEQKQSE........KEKL........AADFKEMLK...EkkvppfakwdkelpkifaDPRFKAIATTaERRALFDRYVK 414- 480 (111.60/66.96) RAEEERLEK..REALR..AAMNG....FRELLDEV.......AEEL...DHTVTYADFETMKG...D..................DPRFKALEKK.ERETLLNERIA 484- 546 (86.15/49.78) KAEEERLRK.eREA.....AVTA....FHELLAEK......gANE......TTKWATLKEEVR...E..................DPRYKAVARN.EREQVFNDFLA 573- 626 (65.83/36.06) R.EEEELER.iRTKARqkDALDS....YKAILAQK.......VKEA...D..ATWADWR............................R..RIEKE.AEE....KQVT 628- 704 (63.09/34.21) HLEAKELEHlfKEHVR..GIMDAcvrdYKRLLAEAlpeetiqKEDP...DGRIPLDSWTAAKGlmrE..................DARLKRLPKV.EREPL...... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 5| 165.35| 20| 20| 93| 112| 2 --------------------------------------------------------------------------- 20- 42 (27.41/ 7.15) PLggSSGPPPTGqP...GAPFGQPAR 52- 74 (29.46/ 8.23) PF..LRPPPQHL.PmqqPQGLAPPSS 85- 102 (29.16/ 8.07) ....TAGPAPQR.P...PQQFSLPPR 103- 122 (43.51/15.62) PF..SPGPPSNF.R...PPVWGLPPR 126- 143 (35.80/11.56) PL..QQGPPPAF.A...PG..GRPPM --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 55.54| 13| 15| 162| 174| 3 --------------------------------------------------------------------------- 162- 174 (22.81/13.19) GP.RLQGASTGVNS 178- 191 (17.03/ 7.75) GPgELNSTQGGAGS 194- 203 (15.70/ 6.50) G....QKAEAGKDE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.66| 12| 45| 230| 241| 6 --------------------------------------------------------------------------- 230- 241 (24.11/16.93) YYYNSVTGESTY 278- 289 (25.55/18.34) YYYNTTTQETSW --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) PGANYVRDRGP 2) RPPAAEPRRETYREHRDKRP | 720 734 | 730 753 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab