<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13567
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MLDQHPASWSKNGIIAYSDSNSTKGNLCITFLENINGSNWRFHPPARYVIHPQLHEVPISSGSKKTNSSGSNTTVATTAATVSKSTTAGGSGSPSQHTTASNGATSNSKSSNHFFYDITSIHWNNWFSLPGDMLAVCDELGNMTMLIAGQSPEGATTFEKLTMLFQDNIYKIHNHVAPLAQQSDKNIGGTIEKKRTKKEYNTRILDFHWLSSSKSIIISQFCAFDSTSNVYRNKALQIAPSGVFYPPFMKYACMAVRRNGQLDFWYQFSNSKDHKKINLHLLPSQNQRLKELDWFQFARITPMKDDQSILVSGYSKLTKKICFYKVRVNWNTPSTNKNNTLNDPTLTVTPILEVPLSTVDSEGRVLKFYDLVVLSKTAIDKDTSAEVLIVYHICGTQKTLIKRFKLMNSYLAMDFLSVLKPGIESINGGNMQPIKSKHYTLRHGHDIFLDKRVSNITTELLDNFVTFFYDDGSVDVFNQNDWNKERERIKSQSNKSKFLNVMTSALSTGLSFQNIPLSSAIDWVRLSPTMTGIIYKLKTDHVPRFVTLTRPDLTDPSLDELDAIAFAFTFVNSTHRQLSSEDLSVACKAHIKNLSEMSEDRAKEFIMTLMSNLYPFFNVSPDAPKDIMDKMISSRPIQKIMLLQLELGTRLKDERIAQMARVILYLKNVLFAFNGVARNLQFAIEQMNNGNTNASTKMFQTLFSKQDLIYSLIPIANWFVKFVTFLIQEVLLLVNNPSESKNTLVLGVFGAKMPRQLILSVLNEIKKIMQIISKFPETTYPVLNESSTYLRMVLSDTPVNFEKFETFLIDVNNKFTAFSEQQPASEKDNILKREYSLLIQAEVPPSHSRISDFLLAYSCNAVISHIKPSDVYFTDTTGLRLTDTEFLEPNFSHLLQPISEGVVVNLLSEDQNSSKKFSQMTIDGVTYDKFSPKELQNGKMKRCSRCGAVTRAGYVIAEDKTIVPTSIHTKRWPTMYTRTCICSGMLYELQH |
Length | 991 |
Position | Tail |
Organism | Kazachstania saulgeensis |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycetaceae> Kazachstania.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.255 |
Instability index | 44.05 |
Isoelectric point | 8.96 |
Molecular weight | 112125.12 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP13567
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 42.18| 11| 28| 257| 268| 1
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257- 268 (19.52/14.84) RRNGQLDfWYQF
287- 297 (22.66/11.92) QRLKELD.WFQF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 158.70| 52| 90| 771| 827| 2
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771- 827 (81.09/58.69) IISKF.PETTYPVlneSSTYLRmvLSDTPVNFEKFETFLIDVNNKFTA..FSEQQPASEK
862- 916 (77.61/44.09) VISHIkPSDVYFT...DTTGLR..LTDTEFLEPNFSHLLQPISEGVVVnlLSEDQNSSKK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 165.15| 55| 209| 307| 384| 3
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324- 384 (75.08/99.69) YKVRVNwNTPstnKNNTLNDPTLTvTP......ILEVPLSTVDSEGRVLKFYDLVVLSKTAIdKDTS
535- 595 (90.07/53.96) YKLKTD.HVP...RFVTLTRPDLT.DPsldeldAIAFAFTFVNSTHRQLSSEDLSVACKAHI.KNLS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 93.21| 31| 201| 1| 48| 4
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4- 44 (42.37/67.97) QHpaSWSKNGiiaySDSNSTKGNlciTFLENING...SNWrFH.P
96- 130 (50.83/23.52) QH..TTASNG....ATSNSKSSN...HFFYDITSihwNNW.FSlP
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