<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13556

Description Uncharacterized protein
SequenceMAEEKQPDPPPIYELHPPEWVPRAHASADLGYVGFFAPRPDDAEEVLTETNVKNGLILDHAVPAESYSAQDTIKGNLLDKENALSELEDLLNQVFVRKAESIPQIPSTSFRMPSRVTLNDTKREAWFADLANPDVPLYKLGKNVPHGAKGHDLLDLLHTKNVAIPRAVWFLRVFGGNETAGLRNKPGYNPTQYSVEWANVVTSYLKKQLTDIALPTAHRLGLNIKQTFKNFLADTEARERWISRFTYSLKLLHTFYAEGLVDNRTFLAWLVQQMGTCNLAQLGFVAHLADEYLDGMLISRALTHHFVEACLARIVEIHSTSAKDHLANLEDMLKDLLSRCFLAQSDAFVSPRAWMTYGELLEDIFSQSPATDLSDSVGDRNARALHRTFLDRLADVQHRNEAMLFRHLPPRVVGSLTSALADIRLLNSLSGTTDMDIVVFFDDTLGSQSSFARKLDILLTWSVTSMQYGDHRPYAAGGLLRTWRHKVGERAIRHEAASPDEYIQDQLFDWLDSSQDAAEPENLPAVSLMFGQLVKDGLFSYQAYIQRLIARGEDGLSFAQAEHSRHRDFLRWIPLHSSDASLTRQRKVALYGVRARETPEDVNEREIRKEIRALLPEVFEEEQLTTTFWSSCSTLLNAPRYEQVRTVNGWLLPILRKHIKQRAQDAAESSHILRVYTLTVILMAHGKCYSSILELTLFTLEHTETTKLLTVIIETLCQHMEVWACMNRMRDVTAALYGAHQFWRAQGVHSRALMHMLLQVDQERFLETEQRQQVLADVSIYTHALQPTSQRPETVPVVLPEILLLATDLNPEAASNLAKNLWYKFMTASDWAWKVWDNTIASLRQIPAMVADIEGRRACALRYAHFLRHIDQHLPRGFDKHVLEWFLGAGKNEVAALCSETWDVVMVVLLHLCVCGALTTTTILHGLIYPVWQAAATATSSDQAKNLEVLLAAANSLFERLLLRHECATGLPPQDVFEAHGLQTRWRDVFREAHFTSLVDNIPTLVLVEHNAVLVDNLRQGCMSLRQAICQFSVFRLGVYRDLDAVQYAFEKLLEYRGIPETMYEPLITALRLMLRDPSQGAVSEEDGFVAVSSLLTPWKLAATAIEIRLTLKQLGEGLTRDSTRNAAQLSLNRLTTFVFQQCKTPEEADFVAEMMTEVSQEVAGKFVNAGLQRVVDLCNAPCNFSDGRSAEEFVANTGEVLRLLSKIVERFRNAALPPLMPHIQDKFVYAFCTRLNQVKDVLTEEKPIALAEDRTHHASHCAIFLARLLQFDLGFPGAWTAQVKSLTESLCKIFIELIMLHGHGSGLDVVAFPLLLDTLYCLLDEMPVDPKATTFDPFRNYPEFELSQLPVGMPPEHRSRMRALLPYVALNQTVADLAYATRDASGALHPVQPVQNRPWEWTEHLGDISPGDPAAPAADKDKDGPNEHATVRNSASLALELFAARMTGETLVPAYDDARVDAAVRTFQEGTAGESVFIRDWRETRVALPDELAGAGRGRMEHEDDPPAATSSQRASPALSVRSGRGSAHPSGPSSTASIKQSPAQGHAVQHQLSRLSVSTSATSEIIDVDSFDVGGVSGKRKATSADIDDEIEIIEGPSKATKKPRAKASSKTKTKKR
Length1619
PositionKinase
OrganismPostia placenta MAD-698-R-SB12
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Polyporales> Dacryobolaceae> Postia.
Aromaticity0.08
Grand average of hydropathy-0.200
Instability index40.74
Isoelectric point5.85
Molecular weight181154.12
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13556
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     521.25|     131|     564|     268|     413|       1
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  268-  400 (212.43/133.26)	AWLVQQMGTCNLAQLGFVAHlaDEYLDGMLISRALTHHFVEACLARIVEIHSTSAKDHLANLEDMLKDLLSRCFLAQSDAFVSP..........RAWMTYGELLED......IFSQSPATDLSDSVG.DRNARALH.RTFLDRLADVQHRN
  452-  578 (186.21/120.99)	ARKLDILLTWSVTSMQYGDH..RPYAAGGLL.RTWRHKVGE....RAIRHEAASPDEY...IQDQLFDWLDSS.QDAAEPENLP..........AVSLMFGQLVKDglfsyqAYIQRLIARGEDGLSfAQAEHSRH.RDFL.RWIPL.HSS
 1164- 1271 (122.61/69.85)	..........................AGKFVNAGL.QRVVDLCNAPCNFSDGRSAEEFVANTGEVLR.LLSKIVERFRNAALPPlmphiqdkfvYAFCTRLNQVKD......VLTEEKPIALAE....DRTHHASHcAIFLARL..LQ...
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.63|      30|     131|    1308|    1337|       2
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 1308- 1337 (52.45/36.29)	LDVVAFPLLLDTLYCLLDEMPVDPKATTFD
 1440- 1469 (50.17/34.34)	LELFAARMTGETLVPAYDDARVDAAVRTFQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     247.20|      95|     868|      47|     148|       3
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    9-  114 (142.04/120.32)	PPPIYELHPPEWVPR.AHASADLGYVGFFAPRPD............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................daeevLTETNVKNGLILDHAVPAESYSAQDTIKgNLldkENALSELEDLLNQVFVRK..AESIPqiPSTSFRMPS
  115-  148 (23.14/11.39)	RVTLNDTKREAWFADlANPDVPLYKLGKNVPHGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
  918-  981 (82.02/53.88)	..................................kghdlldllhtknvaipravwflrvfggnetaglrnkpgynptqysvewanvvtsylkkqltdialptahrlglnikqtfknfladtearerwisrftyslkllhtfyaeglvdnrtflawlvqqmgtcnlaqlgfvahladeyldgmlisralthhfveaclariveihstsakdhlanledmlkdllsrcflaqsdafvsprawmtygelledifsqspatdlsdsvgdrnaralhrtfldrladvqhrneamlfrhlpprvvgsltsaladirllnslsgttdmdivvffddtlgsqssfarkldilltwsvtsmqygdhrpyaaggllrtwrhkvgerairheaaspdeyiqdqlfdwldssqdaaepenlpavslmfgqlvkdglfsyqayiqrliargedglsfaqaehsrhrdflrwiplhssdasltrqrkvalygvraretpedvnereirkeirallpevfeeeqltttfwsscstllnapryeqvrtvngwllpilrkhikqraqdaaesshilrvytltvilmahgkcyssileltlftlehtettklltviietlcqhmevwacmnrmrdvtaalygahqfwraqgvhsralmhmllqvdqerfleteqrqqvladvsiythalqptsqrpetvpvvlpeilllatdlnpeaasnlaknlwykfmtasdwawkvwdntiaslrqipamvadiegrracalryahflrhidqhlprgfdkhvlewflgagknevaalcsetwdvvmvvllhlcvcgaLTTTTILHGLIYPVWQAAATATSSDQAK.NL...EVLLAAANSLFERLLLRHecATGLP..PQDVFEAHG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     184.46|      54|     138|    1340|    1394|       4
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 1340- 1394 (92.10/64.30)	RNYPEFELSqLPVGMPPEHRSRM.RALLPYVALNQTVADLAYATRDASGALHPVQP
 1480- 1534 (92.36/59.89)	RDWRETRVA.LPDELAGAGRGRMeHEDDPPAATSSQRASPALSVRSGRGSAHPSGP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      96.23|      28|     496|     237|     267|       5
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  237-  267 (44.74/34.19)	ARERWISRFTYSLKLLHTFYAeglVDNRTFL
  739-  766 (51.49/31.30)	AHQFWRAQGVHSRALMHMLLQ...VDQERFL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.69|      13|     141|     580|     592|      11
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  580-  592 (23.67/15.78)	ASLTRQRKV..ALYG
  724-  738 (22.02/14.14)	ACMNRMRDVtaALYG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13556 with Med12 domain of Kingdom Fungi
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