<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13533

Description Uncharacterized protein
SequenceMDGYLQTALVANTASPQSNRTSHLAKLLKPCPPSNKDFNCDNFHAVEGTYQLIQDIHFNTIAPQFSLGTRASILDVRPKQLTKSSSSAASSNADSGPTASTTTPPPPPSSSSEHLYSNEDDAGSSTTTLQPLPSTSGAARNGSTPFISQQSTPQLSPPPPGLAVTVHAPLTFPVAPNEEMDISRSAALPIPNVVARSYDSTSSSYQQPDTITNGALTPPHSRTTPTSSIPTSSPCNPIHHHHHNNAASSTGSVATPTPNPSTPFTLHHHQPQPLHPHATDPTHALSLENTSSSTSTGSPSNGGISDLSTSVSSLSALFSRRNSVRFLHSPQRKPKNNLAKTKSSFVLRMIIHDRLAHVLANRTVEDSFIFFNVGTSFLWMDANGKPKDPLSRIVFTKAYPTCHDVNLVTKCNEHLDVIIGFSSGDIVWYDPLTSKYFRLNKDGNMKRGAVTNIKWIPGSEDLFMASFSDGTILILDKDREDQAYTPTLPTNFVDHQFHAVHPHKSAKYNPVAHWSMTRKGILSFEFSPDSVHLAIIGMDGTLRVMDHRQEKLLDIFTSYYGNFRCVTWSPDGKYLLTGGEDDLVTIWGFAEKRIVARCQGHKSWVTSVAFDPYRCDDKVYRFGSVGEDCKLILWDFSYSALHRPKNKRRTTGNTPKSPRSPKDTHRFSFVGADTMKNRTPALSQMFDRLSTYDLTNSNEAITNASFYRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNTFGFKKRSSTAIASKYYHQHHPHLQSSPPTTLDYLSVAAAATPSHHLSMPTLHPAPSKKQVPLLQPSTSRTIHADPCVDLIFRHDGIVTTDRRGRIRTWGRP
Length862
PositionTail
OrganismAbsidia repens
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Cunninghamellaceae> Absidia.
Aromaticity0.08
Grand average of hydropathy-0.687
Instability index52.93
Isoelectric point9.15
Molecular weight95809.51
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13533
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      99.71|      15|      15|     709|     723|       1
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  709-  720 (24.01/ 8.72)	....QQQQQQQQQQQQ
  721-  736 (31.16/12.78)	QQQqQQQQQQQQQQQQ
  737-  748 (23.29/ 8.31)	QQQ.QQQQQQQQQ...
  749-  759 (21.25/ 7.16)	.....QQQQQQQQQQQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.64|      24|      50|      85|     108|       2
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   85-  108 (44.35/15.48)	SSSAAS..SNADSGPTASTTTP...PPPP
  109-  132 (26.70/ 6.66)	SSSSEHlySNED..DAGSSTTT...LQPL
  134-  160 (32.60/ 9.61)	STSGAA..RNGSTPFISQQSTPqlsPPPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.39|      19|      25|     226|     244|       3
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  226-  244 (41.39/21.52)	TSSI..PTSSPCNPIHHHHHN
  250-  270 (33.99/16.27)	TGSVatPTPNPSTPFTLHHHQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     125.51|      33|      44|     566|     602|       4
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  526-  554 (42.33/21.33)	.............FSP...DSV.HLAII..GMDGTLRVMDHRQEKLLD
  564-  596 (60.71/34.97)	RC.........VTWSP...DGK.YLLTG..GEDDLVTIWGFAEKRIVA
  597-  636 (22.47/15.49)	RCqghkswvtsVAFDPyrcDDKvYRF.GsvGEDCKLILWDF.......
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     153.05|      47|     311|     313|     375|       5
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  313-  365 (69.47/39.22)	SLSALFSRRNSVRFL.HSPQRKPKNNLAK...TKSSFVlrMIIHDrlahV.LANRTVE
  377-  413 (34.33/25.71)	.............FLwMDANGKPKDPLSRivfTK.AY...PTCHD....VnLVTKCNE
  637-  670 (49.26/15.04)	SYSALHRPKNKRRTT.GNTPKSPRSPKDT...HRFSFV....................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.89|      21|      25|     768|     788|       6
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  768-  788 (39.57/19.31)	SSTAIASKYYHQHHPHLQSSP
  796-  816 (38.33/18.48)	SVAAAATPSHHLSMPTLHPAP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.51|      10|      23|      48|      57|       7
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   48-   57 (18.76/12.97)	GTYQLIQDIH
   68-   77 (16.75/10.78)	GTRASILDVR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.96|      16|      24|     425|     443|       8
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  424-  440 (25.67/16.76)	G........DIVWYdPLTSKYFRLN
  443-  466 (22.30/15.32)	GnmkrgavtNIKWI.PGSEDLFMAS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13533 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) PKNKRRTTGNTPKSPRSPKDTHRFSFVGADTMKNRTPALSQMFDRLS
2) SNEAITNASFYRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQNTFGFKKRSSTAIASKYYHQHHPHLQSSPPTTLDYLSVAAAATPSHHLSMPTLHPAPSKKQVPLLQPSTSR
3) TRASILDVRPKQLTKSSSSAASSNADSGPTASTTTPPPPPSSSSEHLYSNEDDAGSSTTTLQPLPSTSGAARNGSTPFISQQSTPQLSPPPPGLAVTVHAPLTFPVAPNEEMDISRSAALPIPNVVARSYDSTSSSYQQPDTITNGALTPPHSRTTPTSSIPTSSPCNPIHHHHHNNAASSTGSVATPTPNPSTPFTLHHHQPQPLHPHATDPTHALSLENTSSSTSTGSPSNGGISD
644
697
69
690
830
306










Molecular Recognition Features






MoRF SequenceStartStop




NANANA