<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13518

Description Kinase-like domain-containing protein
SequenceMSMVEYKLKRDACRPKVLDKYDIIGFISSGTYGRVYKAKSRNPDDPKEYAIKKFKPDREGDTHHYVGISQSACREIALCRELDHRNVVGLEEVLLEDKAIFMVFEYAEHDFLQIIHHHLHTERKSIQEIVIKSILWQLINGVAYLHANWVLHRDLKPANVLLTNEGVVKIGDLGLARLFNKPPHPLFSGDKVVVTIWYRAPELLFGARHYTKAVDMWAVGCIFGELLALKPIFKGEEAKMENKKTVPFQRSQLSKIFEILGTPGKDRWPTIDQLPDYNQLSSFPQCVNNLKQVYQLMPGVKTEAGFNLLSALLEYDPAKRITAEKALNHPYFQEEPKPVMNVLAQQNVEYPLRRITQEDNDIKSTKSGMTKDDHSNRPAKKARNA
Length385
PositionKinase
OrganismAbsidia repens
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Cunninghamellaceae> Absidia.
Aromaticity0.09
Grand average of hydropathy-0.435
Instability index37.40
Isoelectric point8.91
Molecular weight44178.45
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13518
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      73.44|      17|      17|     181|     197|       1
---------------------------------------------------------------------------
  156-  179 (17.37/ 7.37)	KPANVLLTNEGV..VkigdlglARLF
  181-  197 (31.76/18.30)	KPPHPLFSGDKV..V.......VTIW
  199-  217 (24.31/12.64)	RAPELLFGARHYtkA.......VDMW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.99|      13|      20|      58|      70|       2
---------------------------------------------------------------------------
   58-   70 (24.56/17.98)	REGDTHHYVGISQ
   80-   92 (22.43/15.83)	RELDHRNVVGLEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.23|      17|      20|     314|     330|       3
---------------------------------------------------------------------------
  314-  330 (29.20/21.62)	EYDPAKRITAEKALNHP
  335-  351 (30.03/22.43)	EPKPVMNVLAQQNVEYP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13518 with CDK8 domain of Kingdom Fungi
Unable to open file!