<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13482

Description zinc finger protein 271 isoform X3
SequenceMQHVSAASSVPSVVAPVVTTGGTTITLGGPPPLPKSEHKEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAHGGQLPPPPPLPPQVTSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASSAGGLPPATSGNGGQPVTVTTTSSSTSSGGGSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGNGGQNVALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKVPHHSATTTMHTIQQITAGAAGGAGAVQLTPGLVPLVTSTLISHNAAAQQQSQKQQAAAQQQAAAAAAAQQQAAQQQAAVAAHQQHQQQVAAQHQQQAAVAAHQQQQQLQQQQQQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLPANVEQHPVVY
Length888
PositionKinase
OrganismDrosophila ficusphila (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.05
Grand average of hydropathy-0.761
Instability index48.83
Isoelectric point9.30
Molecular weight98319.41
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13482
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            17|     819.96|      27|      27|     535|     561|       1
---------------------------------------------------------------------------
  220-  244 (24.40/ 8.51)	...HVCDICgKMFQFR.YQLIVHR.RYHS.E
  245-  272 (33.35/14.31)	RKPFMCQVCgQGFTTS.QDLTRHG.KIHI.G
  273-  300 (26.39/ 9.80)	GPMFTCIVCfNVFANN.TSLERHM.KRHS.T
  301-  328 (52.80/26.91)	DKPFACTICqKTFARK.EHLDNHF.RSHT.G
  329-  356 (58.48/30.59)	ETPFRCQYCaKTFTRK.EHMVNHV.RKHT.G
  357-  384 (57.04/29.66)	ETPHRCDICkKSFTRK.EHYVNHY.MWHT.G
  385-  412 (49.63/24.86)	QTPHQCDVCgKKYTRK.EHLANHM.RSHT.N
  413-  440 (52.95/27.00)	ETPFRCEICgKSFSRK.EHFTNHI.LWHT.G
  441-  468 (59.43/31.20)	ETPHRCDFCsKTFTRK.EHLLNHV.RQHT.G
  469-  496 (59.86/31.49)	ESPHRCSYCmKTFTRK.EHLVNHI.RQHT.G
  497-  524 (55.60/28.73)	ETPFKCTYCtKAFTRK.DHMVNHV.RQHT.G
  525-  552 (60.51/31.90)	ESPHKCTYCtKTFTRK.EHLTNHV.RQHT.G
  553-  580 (58.62/30.68)	DSPHRCSYCkKTFTRK.EHLTNHV.RLHT.G
  581-  608 (56.00/28.98)	DSPHKCEYCqKTFTRK.EHLNNHM.RQHS.S
  609-  637 (52.06/26.43)	DNPHCCNVCnKPFTRK.EHLINHMsRCHT.G
  638-  666 (37.53/17.02)	DRPFTCETCgKSFPLK.GNLLFHQ.RSHTkG
  670-  697 (25.32/ 9.11)	ERPFACEKCpKNFICKvPHHSATT.TMHT..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     107.09|      22|      22|     760|     781|       2
---------------------------------------------------------------------------
  751-  775 (36.38/11.30)	AAAAQQqaaQQQAAVAAHQQHQQQV
  776-  794 (39.23/12.70)	AAQHQQ.....QAAVAAHQQ.QQQL
  839-  858 (31.48/ 8.91)	..QQQG...HPQAPPPQQQQQPPPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.25|      18|      22|     795|     815|       4
---------------------------------------------------------------------------
  795-  814 (27.02/11.61)	QQQQQQlLQLSiQQAAHHHQ
  820-  837 (38.23/12.09)	QQQQQQ.HQQQ.QQQQQHHQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.13|      26|      51|     141|     166|       5
---------------------------------------------------------------------------
  138-  163 (44.44/27.89)	SAGGL...PPATSGNGGQPVTVTTTSSST
  164-  186 (37.32/22.11)	SSGG....GSTTS..GGTTTTAGELLMPK
  187-  215 (39.37/23.77)	MEGGIhgvDGSGNGNGGQNVALAPDGTPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      91.69|      20|     621|      81|     100|       6
---------------------------------------------------------------------------
   21-   39 (20.88/ 6.43)	....GG.ttiTLGGPPPLPKSEHK
   81-  100 (43.24/20.21)	AAAHGG....QLPPPPPLPPQVTS
  703-  724 (27.57/10.55)	AGAAGGagavQLT..PGLVPLVTS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13482 with Med12 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AAAASSAGGLPPATSGNGGQPVTVTTTSSSTSSGGGSTTSGGTTTTAGELLMPKMEGGIHGVDGSGNGNGGQNVALAP
2) HNAAAQQQSQKQQAAAQQQAAAAAAAQQQAAQQQAAVAAHQQHQQQVAAQHQQQAAVAAHQQQ
3) HQLAAAHGGQLPPPPPLPPQVTSHAASAAAAAA
4) LLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLPANVEQHPVVY
5) TTGGTTITLGGPPPLPKSEHKEDGKPPHGIEM
133
729
78
801
19
210
791
110
888
50










Molecular Recognition Features






MoRF SequenceStartStop




1) PPIALISD
856
863