<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13473

Description zinc finger and BTB domain-containing protein 17 isoform X4
SequenceMQHVSAASSVPSVVAPVVTTGGTTITLGGPPPLPKSEHKEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAHGGQLPPPPPLPPQVTSHAASAAAAAAAASTNNAAVAAVMASANAAAAAAAAASSAGGLPPATSGNGGQPVTVTTTSSSTSSGGGSTTSGGTTTTAGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAGGAGAVQLTPGLVPLVTSTLISHNAAAQQQSQKQQAAAQQQAAAAAAAQQQAAQQQAAVAAHQQHQQQVAAQHQQQAAVAAHQQQQQLQQQQQQLLQLSIQQAAHHHQQEQHRQQQQQQHQQQQQQQQHHQQQQQGHPQAPPPQQQQQPPPIALISDPSALARAAIQLQHLPANVEQHPVVY
Length756
PositionKinase
OrganismDrosophila ficusphila (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.04
Grand average of hydropathy-0.763
Instability index53.19
Isoelectric point9.36
Molecular weight82922.24
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13473
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            12|     641.64|      27|      27|     332|     358|       1
---------------------------------------------------------------------------
  180-  207 (53.42/27.34)	G...QTPHQCDVCgKKYTRKEHLANHM.RSHT
  208-  235 (49.79/25.02)	N...ETPFRCEICgKSFSRKEHFTNHI.LWHT
  237-  264 (59.81/31.42)	G...ETPHRCDFCsKTFTRKEHLLNHV.RQHT
  265-  292 (61.02/32.20)	G...ESPHRCSYCmKTFTRKEHLVNHI.RQHT
  293-  320 (56.74/29.46)	G...ETPFKCTYCtKAFTRKDHMVNHV.RQHT
  321-  348 (61.82/32.71)	G...ESPHKCTYCtKTFTRKEHLTNHV.RQHT
  349-  376 (59.68/31.34)	G...DSPHRCSYCkKTFTRKEHLTNHV.RLHT
  377-  404 (60.89/32.12)	G...DSPHKCEYCqKTFTRKEHLNNHM.RQHS
  405-  433 (50.90/25.73)	S...DNPHCCNVCnKPFTRKEHLINHMsRCHT
  434-  461 (45.83/22.49)	G...DRPFTCETCgKSFPLKGNLLFHQ.RSHT
  463-  493 (43.82/21.20)	GqemERPFACEKCpKNFICKGHLVSHM.RSHS
  494-  521 (37.93/17.44)	G...EKPHACTLCsKAFVERGNLKRHM.KMNH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.18|      22|      22|     628|     649|       2
---------------------------------------------------------------------------
  619-  643 (36.58/10.68)	AAAAQQqaaQQQAAVAAHQQHQQQV
  644-  662 (38.18/11.46)	AAQHQQ.....QAAVAAHQQ.QQQL
  707-  726 (28.42/ 6.66)	..QQQG...HPQAPPPQQQQQPPPI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.32|      19|      22|     100|     120|       3
---------------------------------------------------------------------------
   98-  116 (32.00/12.83)	VTSHAASAAAAAAAASTNN
  590-  608 (26.32/10.04)	VTSTLISHNAAAQQQSQKQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.43|      10|     436|      88|      97|       5
---------------------------------------------------------------------------
   27-   36 (21.47/ 7.08)	LGGPPPLPKS
   88-   97 (24.96/ 9.25)	LPPPPPLPPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.89|      16|      22|     137|     155|       6
---------------------------------------------------------------------------
  137-  155 (22.20/19.96)	SSAGGlPPATSgnGGQPVT
  163-  178 (29.69/14.63)	TSSGG.GSTTS..GGTTTT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.49|      11|      14|     679|     689|       7
---------------------------------------------------------------------------
  679-  689 (23.17/ 9.52)	HHHQQEQHRQQ
  696-  706 (22.32/ 8.86)	QQQQQQQHHQQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13473 with Med12 domain of Kingdom Metazoa
Unable to open file!