<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP13459

Description mucin-19 isoform X7
SequenceMMMMDTMDTSQSQPMDVAPAVAVAATSGTALVDFTAAMVSMAATAEAESAESNNNHIGMAEYKEHRKNKKKKREKREREGKEHRHHKHRDREHREHRRHRDRDRERERESGGSHHHHPNNSQHSTSASSSPSSASTTPSATIEYVGGSASASPSYLGGGTAGTGGAVGATTTYPHNLKIRFLLSGQRTELSPPTHQTSATAEVNAPLASSSSASIAVTASATAASAPPATGSSTSGGSSSGNAGSTSSGNSSGGAAAGGAPSVVGSAAYPKTESSKSSGTGSAGGGSSSSSSSSKHGSSSKDISSNSSSQQPSTGSSSNAPSLYVSVPLSTANVPGINLPTSSSSSNTTSESHSASSRSSSAQSQHQQPSNLTTMGGASGAFHGGASSGGSSSVIQHQSGKSSPALGNLVSGNSGGSILSASGVPHPSGNLTATTTESGILKISYEKQTTRVQQLQEQEAPPARRSRSRSGESGSSHHHAHHHHHHPTHHNSHHQQNPQQQQQLHQQQQQSASSQQPHALHSSANSSSSSSTSTSTSSSSMSGGTVPATSSSTSTSKGPSRSGKKRGAAQSKNEAASVSTAATSSAVATTPAEKQSRHSSPHYNATPTPPPLSVAPPAVSSPVVMLQSLSSSSVDSPPATAAAASTTSRSTRNNSSSNANHNGDQTSSSCSSTSSSSSSGGSSGAASVVNLLDSPVNMSASSGSYRGSSNSTSNALPAGSQAKPLNKKMLRAQQTQLYQQQQQQQQQQQQQQQQQQQQQQQQQQQYAPPARSNSPTNLSSASASNSASFTHLQQQQQPQQQHEDLEILQFTNTNTTPSSNAPTSKPNNRTPDLSQASNSSSSAAAVPATTAPLMTLSSQLPLNSMAGGGGSTGGLKFTYESQTQLDVPMLPVSAIKDSPPSSPGSEVGSAMHTATLAASSLTAAAPTSAPAQPGNVRKRGRKAKDSTTAAATAAAAAAASAAVSNAQQDLKDVRLLQNGTASGSSNPASSTPTPPATPAASGTASSASSIITHTAAHMLGNQINPNSSVAQKLSEQLHMEVQDHSIYTADALNSQYAGVPFPGKQRNSSAAISNAAPAPNPLQSMFSGGGINGNMPIPQSLEQLLERQWEQGSQFLMEQAQHFDIASLLNCLHQLQSENLRLEEHVTSLIARRDHLLAVNARLQIPLSTIASSAKAEAHAAMSTTAAPTTTTTTSTSTATSTCTTSVISTLASSSNSGSSSIGLGSNINALTAATTIAAAVSLATTAINTTIPTMANSRPTVAPASSSGVVLDYRGTGSSSNNTNSGNSGSSSNSGGNSGNNTSSNSVNSSNSNPATASSASGPSAPPMSISGLNMTNAANLGMRHVPAAHAYNNAGNSNSSVGILNASGAVNSNSLHHQHSSQQQTQHQSQHQSHPSQQQQHAQQVQQHLHQSHHTSAAVAAAHMLGVGMSLGAGGGAAAGIGRGGSATAMAATAATTTTTFTTTAGTGTGMGQQHHHPHPHQHPSIQIQVGGGGVGVDGLSSTSSSYAAHHAALYSTHHQSQLRRDDNLAKTS
Length1535
PositionKinase
OrganismDrosophila ficusphila (Fruit fly)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Ephydroidea> Drosophilidae> Drosophila> Sophophora.
Aromaticity0.02
Grand average of hydropathy-0.644
Instability index62.91
Isoelectric point9.56
Molecular weight155538.72
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP13459
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|    1670.30|     230|     248|     391|     637|       2
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   11-  215 (230.46/41.67)	................QSQPMDVAPAVA...VAA........TSGTALvdFTAAMVS...M.AATAEAESAESNNNHIGMAEYKE.HRKNKKK...K.....R......EKREREG...KE.........HRHHK...HRDREHREHRRHRDRDR...ERER.ES......................GGSHHHH..........................PNNSQHSTSASSSPSSASTTPSATI.EY..VGGSASASPSyLGG......G..........TA.......GTGGA....VGAT...ttyPHN...LK...IR........FllSGQRTELSP.PTHQTSATAEVNAP.......LASSSSASI
  233-  386 (189.06/32.56)	STS................GGSSSGNAGST.SSG........NSSGGA...AAGGAP...SVVGSAAYPKTESS..KSS..................GTGSA...........GGG...SSSSSS..SSKHGSSS...KDISSNS...........................................SSQQP................................ST....GSS...SNAPS..............LYVS.VPL......S..........TAnvpginlPTSSS....SSNT......TSE...SHsasSR........S..SSAQ.SQHQQPSNLTTMGGA............SGAFHGGA
  391-  637 (381.94/76.32)	SSSV...........IQHQSGKSSPALGNL.VSG........NSGGSI..LSASGVP...HPSGNLTATTTESGILKISYEKQTT.RVQQLQE...QEAPPAR......RSRSRSG...ESGSSH..HHAHHHHH...HPTHHNSHHQQNPQQQQQLHQQQQ.QS......................ASSQQPH......AlHssansssssstststsSSSMSGGTVPATSSSTSTSKGPSRSG.KK..RGAAQSKNEA.ASV......S..........TA.......ATSSA....VATT......PAE...KQ...SR........H..SSPHYNATPTPPPLSVAPPAVSSPVVM.LQSLSSSSVDSP
  655-  861 (253.66/46.78)	SSSN...........ANHNGDQTSSSCSSTsSSS........SSGGSS..GAASVVNlldSPV.NMSAS...SGSYRGS.SNSTS.NALPAGS...Q.AKPLN......KKMLRA............QQTQLYQQ...QQQQQQQQQQQQQQQQQQQQQQQQ.QY......................A....PP......A.....................RSNS..PTNLSSASASNSASFTHlQQ..QQQPQQQHED.LEIlqftntN..........TT.......PSSNA..............PTS...KP...NN........R...TPDLSQASNSSSSAAAVPATTAP....LMTLSS...QLP
  862- 1014 (158.07/25.74)	LNSM.................................................AGGG...GSTGG..........LKFTYESQTQlDVPMLPVsaiKDSPP.........S.SPGS...EVGSAM..HTA....................TLAASSLTAAAP.TS......................APA.QP...............................GN.V.............RKRG.RK....AKDSTTAA.ATA......A..........AA.......AAASA.....AVS......NAQqdlKD...VRllqngtasG..SSNPASSTPTPPATPAASGTASS.........ASSIITHT
 1026- 1284 (196.16/34.12)	NSSVaqklseqlhmeVQDHSIYTADALNSQ.YAGvpfpgkqrNSSAAI..SNAAPAP...NP...LQSMFSGGGINGNMPIPQS...LEQLLE..................RQW.....EQGSQFlmEQA.QHFD...IASLLNCLHQL...QSENLRLEEHvTSliarrdhllavnarlqiplstiASSAKAE......A.H.................AAMSTTAAPTTTTTTSTSTATSTCT.TSviSTLASSSNSG.SS.......SiglgsninalTA.......ATTIAaavsLATTainttiPTM...AN...SR...................PT.....VA.PASSSGVVLdYRGTGSSSNNT.
 1285- 1508 (260.95/48.38)	.NS..............GNSGSSSNSGGN...SG........NNTSSN..SVNSSNS...NPATASSASGPSAPPMSIS.GLNMT.NAANLGM...RHVPAAHaynnagNSNSSVGilnASGAVN..SNSLHHQHssqQQTQHQSQHQSHPSQQQQHAQQVQ.QH......................L..HQSHhtsaavA..................AAHMLGVGMSLGAGGGAAA.GIGRGG.SA..TAMAAT...A.ATT......T..........TT.......FTTTA....GTGT......GMG...QQ...HH........H..PHPHQH.....PSIQIQVGGGGVGVDG.LSSTSSS.....
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP13459 with Med12 domain of Kingdom Metazoa
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